Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP001784.1-201ENST00000624107 428 ntBASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 MAPK10-350ENST00000641777 965 ntBASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 CR382285.2-201ENST00000624662 1495 ntBASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 PABPC1P8-201ENST00000452851 2086 ntBASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 AC018809.2-201ENST00000602436 3823 ntBASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 AC023421.1-201ENST00000590535 1785 ntBASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LYSMD4Q5XG99 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AL669831.5-218ENST00000591702 1873 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RNA5SP305-201ENST00000362665 119 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RN7SKP103-201ENST00000363848 320 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 SNORA67-201ENST00000384423 137 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC116036.1-201ENST00000412199 367 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RBMY2KP-201ENST00000418221 992 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RPL12P43-201ENST00000420608 499 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 MEMO1P4-201ENST00000453590 386 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 MIR4311-201ENST00000580794 100 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 CUL4AP1-201ENST00000514750 1863 ntBASIC5.54□□□□□ -1.52
LYSMD4Q5XG99 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 AC112255.1-201ENST00000624070 2493 ntBASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 AC011493.1-201ENST00000596753 1632 ntBASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 AC093909.5-201ENST00000621839 1799 ntBASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 RNA5SP339-201ENST00000390987 122 ntBASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 AC105399.1-202ENST00000447303 205 ntBASIC5.53□□□□□ -1.52
LYSMD4Q5XG99 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms