Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR551B-201ENST00000384984 96 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 YWHAZP6-201ENST00000399764 738 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 NFU1P1-201ENST00000413128 774 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 VN1R110P-201ENST00000438988 971 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 PA2G4P1-201ENST00000442248 1197 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 RPL5P7-201ENST00000444235 813 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 OR52E3P-201ENST00000452083 936 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AL358876.1-201ENST00000453364 1075 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AL645937.3-201ENST00000453647 936 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC021660.1-201ENST00000465006 554 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 UBFD1P1-201ENST00000473259 814 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC018639.1-201ENST00000492994 442 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC016559.2-201ENST00000510759 359 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC021678.3-201ENST00000517893 476 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AL356801.1-201ENST00000559320 294 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 RN7SL290P-201ENST00000578661 300 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 WBP1LP12-201ENST00000604449 331 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AL353600.1-201ENST00000608148 251 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 MIR6793-201ENST00000612376 63 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC004801.6-201ENST00000616571 978 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AL360270.2-201ENST00000562952 5985 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC100757.1-201ENST00000616872 1835 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC099654.3-201ENST00000447087 1546 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 PWAR1-201ENST00000624188 2414 ntBASIC4.92□□□□□ -1.62
CCDC58Q4VC31 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC027228.2-201ENST00000567141 2154 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 GAPDHP24-201ENST00000328713 983 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 PPIAP9-201ENST00000403866 498 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AL009179.1-201ENST00000406085 265 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AL389925.1-201ENST00000432257 728 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RBMY2AP-201ENST00000445405 1157 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RBMY2CP-201ENST00000448575 1157 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RBMY2DP-202ENST00000448881 1157 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RBMY2BP-202ENST00000451071 1156 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC090638.1-201ENST00000498296 909 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 RNA5SP441-201ENST00000516809 88 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 HMGN2P36-201ENST00000529541 409 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC022882.1-201ENST00000532142 501 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 PCNAP4-201ENST00000532690 730 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC006530.1-201ENST00000555980 571 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC022106.2-201ENST00000620114 757 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AP001005.3-201ENST00000622049 129 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 AC091932.2-201ENST00000623014 291 ntBASIC4.91□□□□□ -1.62
CCDC58Q4VC31 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC58Q4VC31 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms