Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC025884.1-201ENST00000556034 378 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 MIR3138-201ENST00000585238 82 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC008739.3-201ENST00000603262 127 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKDCP78527 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 CASC19-284ENST00000642142 1868 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PRKDCP78527 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC083899.1-201ENST00000454465 3819 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PRKDCP78527 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PRKDCP78527 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 TRAV35-201ENST00000390462 330 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 RN7SKP106-201ENST00000410832 272 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC021106.1-201ENST00000509020 1058 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC008958.1-201ENST00000511047 682 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC008814.1-201ENST00000603797 406 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC115286.1-201ENST00000604298 434 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC130448.2-201ENST00000624082 374 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKDCP78527 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKDCP78527 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC3.7□□□□□ -1.82
PRKDCP78527 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 LRRC37A17P-201ENST00000570311 4693 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 RPL23AP24-201ENST00000458203 385 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AP003080.1-202ENST00000526526 915 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 AC105254.2-201ENST00000603636 436 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 CYCSP1-201ENST00000604815 315 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 AC006511.3-201ENST00000624929 1783 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 AC022164.1-201ENST00000568767 2673 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 OR7E122P-202ENST00000641144 6171 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKDCP78527 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.69□□□□□ -1.82
PRKDCP78527 MIR105-1-201ENST00000385222 81 ntBASIC3.69□□□□□ -1.82
PRKDCP78527 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKDCP78527 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKDCP78527 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKDCP78527 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKDCP78527 TXNP2-201ENST00000443918 295 ntBASIC3.69□□□□□ -1.82
PRKDCP78527 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKDCP78527 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKDCP78527 AC006499.6-201ENST00000511169 607 ntBASIC3.69□□□□□ -1.82
PRKDCP78527 SCARNA20.4-201ENST00000516969 131 ntBASIC3.69□□□□□ -1.82
PRKDCP78527 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKDCP78527 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKDCP78527 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKDCP78527 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKDCP78527 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 AC005725.1-201ENST00000577346 2607 ntBASIC3.69□□□□□ -1.82
PRKDCP78527 AL592148.3-201ENST00000608771 2646 ntBASIC3.69□□□□□ -1.82
PRKDCP78527 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKDCP78527 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKDCP78527 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKDCP78527 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms