Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RN7SL51P-201ENST00000468230 285 ntBASIC5.31□□□□□ -1.56
VSX2P58304 RPL35AP19-201ENST00000469425 329 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AC100832.1-201ENST00000471945 383 ntBASIC5.31□□□□□ -1.56
VSX2P58304 RN7SL214P-201ENST00000487317 265 ntBASIC5.31□□□□□ -1.56
VSX2P58304 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.31□□□□□ -1.56
VSX2P58304 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 AC125612.1-201ENST00000547580 377 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.31□□□□□ -1.56
VSX2P58304 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.31□□□□□ -1.56
VSX2P58304 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.31□□□□□ -1.56
VSX2P58304 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.31□□□□□ -1.56
VSX2P58304 AC012616.1-201ENST00000600294 197 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AC079395.2-201ENST00000610982 737 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AL118522.2-201ENST00000616045 615 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AC069542.2-201ENST00000624816 216 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.31□□□□□ -1.56
VSX2P58304 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.3□□□□□ -1.56
VSX2P58304 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.3□□□□□ -1.56
VSX2P58304 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VSX2P58304 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.3□□□□□ -1.56
VSX2P58304 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VSX2P58304 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.3□□□□□ -1.56
VSX2P58304 RNA5SP132-201ENST00000364725 118 ntBASIC5.3□□□□□ -1.56
VSX2P58304 AL391422.1-201ENST00000402155 436 ntBASIC5.3□□□□□ -1.56
VSX2P58304 Z93019.1-201ENST00000416450 973 ntBASIC5.3□□□□□ -1.56
VSX2P58304 AL596266.1-201ENST00000448132 400 ntBASIC5.3□□□□□ -1.56
VSX2P58304 ATP5LP5-201ENST00000483050 299 ntBASIC5.3□□□□□ -1.56
VSX2P58304 RN7SL184P-201ENST00000488308 297 ntBASIC5.3□□□□□ -1.56
VSX2P58304 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 RN7SKP253-201ENST00000516424 309 ntBASIC5.3□□□□□ -1.56
VSX2P58304 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VSX2P58304 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.3□□□□□ -1.56
VSX2P58304 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.3□□□□□ -1.56
VSX2P58304 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.3□□□□□ -1.56
VSX2P58304 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.3□□□□□ -1.56
VSX2P58304 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.3□□□□□ -1.56
VSX2P58304 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
VSX2P58304 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.3□□□□□ -1.56
VSX2P58304 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.3□□□□□ -1.56
VSX2P58304 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.3□□□□□ -1.56
VSX2P58304 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
VSX2P58304 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VSX2P58304 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VSX2P58304 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
VSX2P58304 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 OR4F13P-202ENST00000560066 2054 ntBASIC5.29□□□□□ -1.56
VSX2P58304 HSPD1P7-201ENST00000447985 1686 ntBASIC5.29□□□□□ -1.56
VSX2P58304 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 RN7SKP160-201ENST00000363804 340 ntBASIC5.29□□□□□ -1.56
VSX2P58304 U3.10-201ENST00000364459 214 ntBASIC5.29□□□□□ -1.56
VSX2P58304 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 OR10T1P-201ENST00000424327 947 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 AC092106.1-201ENST00000444291 373 ntBASIC5.29□□□□□ -1.56
VSX2P58304 RN7SL583P-201ENST00000475692 287 ntBASIC5.29□□□□□ -1.56
VSX2P58304 SIAH1P1-201ENST00000479411 923 ntBASIC5.29□□□□□ -1.56
VSX2P58304 RN7SL547P-201ENST00000490793 290 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AC090638.1-201ENST00000498296 909 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 GAPDHP62-201ENST00000515313 990 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.29□□□□□ -1.56
VSX2P58304 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.29□□□□□ -1.56
VSX2P58304 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.29□□□□□ -1.56
VSX2P58304 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.29□□□□□ -1.56
VSX2P58304 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VSX2P58304 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.29□□□□□ -1.56
VSX2P58304 AC019322.1-201ENST00000571869 389 ntBASIC5.29□□□□□ -1.56
VSX2P58304 H3F3BP2-201ENST00000583907 357 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 AC002069.2-201ENST00000603580 883 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 AC010245.2-201ENST00000606908 1167 ntBASIC5.29□□□□□ -1.56
VSX2P58304 MIR8080-201ENST00000622224 89 ntBASIC5.29□□□□□ -1.56
VSX2P58304 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms