Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 RNFT1P3-201ENST00000340898 1052 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 RNA5SP273-201ENST00000362484 113 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RNU6-152P-201ENST00000384037 107 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RNU6-883P-201ENST00000384597 107 ntBASIC5.25□□□□□ -1.57
CDH11P55287 OR1F12-201ENST00000402365 945 ntBASIC5.25□□□□□ -1.57
CDH11P55287 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH11P55287 VTI1BP4-201ENST00000427516 527 ntBASIC5.25□□□□□ -1.57
CDH11P55287 NPM1P18-201ENST00000434232 732 ntBASIC5.25□□□□□ -1.57
CDH11P55287 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH11P55287 AL445928.1-201ENST00000435545 222 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RPS23P9-201ENST00000448848 438 ntBASIC5.25□□□□□ -1.57
CDH11P55287 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 SETP20-201ENST00000457046 852 ntBASIC5.25□□□□□ -1.57
CDH11P55287 AC135999.1-201ENST00000478962 479 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RPL7P51-201ENST00000490532 749 ntBASIC5.25□□□□□ -1.57
CDH11P55287 AC008629.2-201ENST00000503783 483 ntBASIC5.25□□□□□ -1.57
CDH11P55287 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH11P55287 AC114781.3-201ENST00000512083 142 ntBASIC5.25□□□□□ -1.57
CDH11P55287 RNA5SP438-201ENST00000516561 112 ntBASIC5.25□□□□□ -1.57
CDH11P55287 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH11P55287 NPM1P52-201ENST00000518264 846 ntBASIC5.25□□□□□ -1.57
CDH11P55287 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 WBP1LP3-201ENST00000523033 208 ntBASIC5.25□□□□□ -1.57
CDH11P55287 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH11P55287 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH11P55287 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 GARSP1-201ENST00000570895 719 ntBASIC5.25□□□□□ -1.57
CDH11P55287 TXNP4-201ENST00000575018 310 ntBASIC5.25□□□□□ -1.57
CDH11P55287 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH11P55287 AC007786.3-201ENST00000615154 596 ntBASIC5.25□□□□□ -1.57
CDH11P55287 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH11P55287 AC241377.1-201ENST00000619797 406 ntBASIC5.25□□□□□ -1.57
CDH11P55287 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH11P55287 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH11P55287 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CDH11P55287 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH11P55287 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH11P55287 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH11P55287 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH11P55287 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.24□□□□□ -1.57
CDH11P55287 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 RN7SKP145-201ENST00000363291 303 ntBASIC5.24□□□□□ -1.57
CDH11P55287 RNU6-618P-201ENST00000363518 112 ntBASIC5.24□□□□□ -1.57
CDH11P55287 RNU6-1331P-201ENST00000363658 106 ntBASIC5.24□□□□□ -1.57
CDH11P55287 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 RNU1-136P-201ENST00000384181 164 ntBASIC5.24□□□□□ -1.57
CDH11P55287 RNA5SP284-201ENST00000384547 118 ntBASIC5.24□□□□□ -1.57
CDH11P55287 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH11P55287 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 EEF1B2P8-201ENST00000414101 671 ntBASIC5.24□□□□□ -1.57
CDH11P55287 RPS4XP5-201ENST00000419038 768 ntBASIC5.24□□□□□ -1.57
CDH11P55287 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 RAB9AP5-201ENST00000437794 597 ntBASIC5.24□□□□□ -1.57
CDH11P55287 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 RPS12P17-201ENST00000438591 377 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 AC015983.1-201ENST00000441577 373 ntBASIC5.24□□□□□ -1.57
CDH11P55287 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 RAB9AP2-201ENST00000443911 597 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AC073109.1-201ENST00000445066 978 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 PPIAP20-201ENST00000449839 135 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 AC018638.3-201ENST00000461273 132 ntBASIC5.24□□□□□ -1.57
CDH11P55287 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.24□□□□□ -1.57
CDH11P55287 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 GAPDHP62-201ENST00000515313 990 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH11P55287 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH11P55287 IGKV3D-34-201ENST00000522638 302 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH11P55287 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms