Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.18□□□□□ -1.42
GPC3P51654 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.18□□□□□ -1.42
GPC3P51654 REREP1Y-201ENST00000422655 198 ntBASIC6.18□□□□□ -1.42
GPC3P51654 REREP2Y-201ENST00000439103 200 ntBASIC6.18□□□□□ -1.42
GPC3P51654 RPS7P6-201ENST00000485777 579 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AC090638.1-201ENST00000498296 909 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AC021146.10-201ENST00000515628 706 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AC139697.1-201ENST00000548429 745 ntBASIC6.18□□□□□ -1.42
GPC3P51654 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.18□□□□□ -1.42
GPC3P51654 MIR4311-201ENST00000580794 100 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AL360012.1-201ENST00000602813 131 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AC025574.2-201ENST00000615621 514 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AC244517.3-201ENST00000616254 1235 ntBASIC6.18□□□□□ -1.42
GPC3P51654 AC005840.5-201ENST00000619166 599 ntBASIC6.18□□□□□ -1.42
GPC3P51654 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.18□□□□□ -1.42
GPC3P51654 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GPC3P51654 AC235565.1-201ENST00000456962 1325 ntBASIC6.18□□□□□ -1.42
GPC3P51654 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GPC3P51654 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.18□□□□□ -1.42
GPC3P51654 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.17□□□□□ -1.42
GPC3P51654 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 AC011933.2-201ENST00000578539 2790 ntBASIC6.17□□□□□ -1.42
GPC3P51654 GAPDHP24-201ENST00000328713 983 ntBASIC6.17□□□□□ -1.42
GPC3P51654 RNU4-2-201ENST00000365668 141 ntBASIC6.17□□□□□ -1.42
GPC3P51654 AC009804.1-201ENST00000400949 179 ntBASIC6.17□□□□□ -1.42
GPC3P51654 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 OR6D1P-201ENST00000436165 939 ntBASIC6.17□□□□□ -1.42
GPC3P51654 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.17□□□□□ -1.42
GPC3P51654 AL163193.1-201ENST00000444895 788 ntBASIC6.17□□□□□ -1.42
GPC3P51654 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.17□□□□□ -1.42
GPC3P51654 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.17□□□□□ -1.42
GPC3P51654 AC008638.1-201ENST00000506035 866 ntBASIC6.17□□□□□ -1.42
GPC3P51654 RNU6-943P-201ENST00000516960 98 ntBASIC6.17□□□□□ -1.42
GPC3P51654 AC027308.1-201ENST00000517993 110 ntBASIC6.17□□□□□ -1.42
GPC3P51654 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.17□□□□□ -1.42
GPC3P51654 AL118522.2-201ENST00000616045 615 ntBASIC6.17□□□□□ -1.42
GPC3P51654 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 AC000095.2-202ENST00000637415 154 ntBASIC6.17□□□□□ -1.42
GPC3P51654 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
GPC3P51654 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.17□□□□□ -1.42
GPC3P51654 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
GPC3P51654 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
GPC3P51654 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 AC010266.2-201ENST00000564741 3255 ntBASIC6.17□□□□□ -1.42
GPC3P51654 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GPC3P51654 AC005261.6-201ENST00000623072 1387 ntBASIC6.17□□□□□ -1.42
GPC3P51654 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 MSL3P1-202ENST00000440028 1468 ntBASIC6.16□□□□□ -1.42
GPC3P51654 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.16□□□□□ -1.42
GPC3P51654 AC011503.2-201ENST00000594230 1500 ntBASIC6.16□□□□□ -1.42
GPC3P51654 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.16□□□□□ -1.42
GPC3P51654 RNU6-171P-201ENST00000384354 107 ntBASIC6.16□□□□□ -1.42
GPC3P51654 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.16□□□□□ -1.42
GPC3P51654 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.16□□□□□ -1.42
GPC3P51654 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.16□□□□□ -1.42
GPC3P51654 RN7SL51P-201ENST00000468230 285 ntBASIC6.16□□□□□ -1.42
GPC3P51654 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.16□□□□□ -1.42
GPC3P51654 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.16□□□□□ -1.42
GPC3P51654 RNA5SP34-201ENST00000516887 130 ntBASIC6.16□□□□□ -1.42
GPC3P51654 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.16□□□□□ -1.42
GPC3P51654 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.16□□□□□ -1.42
GPC3P51654 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 DHFRP1-201ENST00000579682 559 ntBASIC6.16□□□□□ -1.42
GPC3P51654 MIR1269B-201ENST00000580405 75 ntBASIC6.16□□□□□ -1.42
GPC3P51654 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.16□□□□□ -1.42
GPC3P51654 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.16□□□□□ -1.42
GPC3P51654 AC025857.2-201ENST00000602711 238 ntBASIC6.16□□□□□ -1.42
GPC3P51654 AC013244.1-201ENST00000604279 193 ntBASIC6.16□□□□□ -1.42
GPC3P51654 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.16□□□□□ -1.42
GPC3P51654 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 CASC19-264ENST00000641912 1184 ntBASIC6.16□□□□□ -1.42
GPC3P51654 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.16□□□□□ -1.42
GPC3P51654 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
GPC3P51654 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.16□□□□□ -1.42
GPC3P51654 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
GPC3P51654 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GPC3P51654 AL355488.2-201ENST00000609909 2850 ntBASIC6.16□□□□□ -1.42
GPC3P51654 AC138907.8-201ENST00000623981 2256 ntBASIC6.15□□□□□ -1.42
GPC3P51654 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GPC3P51654 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
GPC3P51654 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
GPC3P51654 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.15□□□□□ -1.42
GPC3P51654 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms