Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 HMGB1P42-201ENST00000532126 553 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 H3F3BP2-201ENST00000583907 357 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC010487.1-201ENST00000594408 1172 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC008833.1-201ENST00000611633 691 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 RN7SL544P-201ENST00000617232 284 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 RN7SL763P-201ENST00000620922 284 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC021766.1-201ENST00000624404 741 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AL138820.1-201ENST00000617901 5305 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC007842.1-201ENST00000597336 2039 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC083843.2-201ENST00000568248 6253 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 CUL4AP1-201ENST00000514750 1863 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC133552.1-201ENST00000569988 4007 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CX3CR1P49238 MUC2-202ENST00000613187 4845 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC245100.2-201ENST00000454544 1679 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 RN7SKP275-201ENST00000364626 301 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC127526.2-201ENST00000426436 775 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AC009784.1-201ENST00000426484 460 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC006335.2-201ENST00000437993 330 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AC073465.2-201ENST00000440938 498 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AC092106.1-201ENST00000444291 373 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 GAPDHP14-201ENST00000450472 937 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AP006222.1-205ENST00000450734 457 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 RPS23P6-201ENST00000466136 431 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC098583.1-201ENST00000480875 255 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 RPL37P23-201ENST00000492641 294 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.87□□□□□ -1.63
CX3CR1P49238 RNA5SP473-201ENST00000516402 125 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CR1P49238 TRIM77BP-201ENST00000524985 1119 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CR1P49238 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC067773.1-201ENST00000603284 1094 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 FAM72A-208ENST00000607379 1139 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 MIR6071-201ENST00000616741 78 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AC015660.5-201ENST00000623238 564 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 AC099654.6-201ENST00000636487 512 ntBASIC4.87□□□□□ -1.63
CX3CR1P49238 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CR1P49238 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CX3CR1P49238 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CR1P49238 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CR1P49238 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CR1P49238 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.86□□□□□ -1.63
CX3CR1P49238 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CR1P49238 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms