Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRPC1P48995 OR6C71P-201ENST00000432580 913 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 HMGB3P10-201ENST00000434734 572 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.6□□□□□ -1.51
TRPC1P48995 AL358876.1-201ENST00000453364 1075 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.6□□□□□ -1.51
TRPC1P48995 RPL38P3-201ENST00000484463 213 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRPC1P48995 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.6□□□□□ -1.51
TRPC1P48995 CR383658.1-201ENST00000514609 734 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 OR8Q1P-201ENST00000526467 655 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.6□□□□□ -1.51
TRPC1P48995 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRPC1P48995 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.6□□□□□ -1.51
TRPC1P48995 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC027216.1-201ENST00000577726 685 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.6□□□□□ -1.51
TRPC1P48995 AC067773.1-201ENST00000603284 1094 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 AC015982.1-201ENST00000608113 465 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 AC022400.9-201ENST00000623633 273 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 AP001962.1-201ENST00000624114 559 ntBASIC5.6□□□□□ -1.51
TRPC1P48995 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRPC1P48995 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TRPC1P48995 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRPC1P48995 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.6□□□□□ -1.51
TRPC1P48995 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
TRPC1P48995 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRPC1P48995 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TRPC1P48995 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRPC1P48995 QRSL1P1-201ENST00000400977 1540 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 GNL2P1-201ENST00000451274 2190 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRPC1P48995 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.59□□□□□ -1.51
TRPC1P48995 BRAFP1-201ENST00000445336 2703 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 RN7SKP275-201ENST00000364626 301 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRPC1P48995 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.59□□□□□ -1.51
TRPC1P48995 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 AL590609.2-201ENST00000421430 368 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 RPL12P11-201ENST00000439970 501 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 FTLP8-201ENST00000446770 267 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 PTMAP3-201ENST00000447474 330 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 PPIAP27-201ENST00000453800 265 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 RPL12P39-201ENST00000455456 496 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRPC1P48995 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 GLUD1P3-202ENST00000508551 200 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 AC130364.2-201ENST00000528639 604 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.59□□□□□ -1.51
TRPC1P48995 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.59□□□□□ -1.51
TRPC1P48995 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.59□□□□□ -1.51
TRPC1P48995 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.59□□□□□ -1.51
TRPC1P48995 AL159169.2-201ENST00000610061 1269 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRPC1P48995 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.59□□□□□ -1.51
TRPC1P48995 AC096708.4-201ENST00000620563 552 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.59□□□□□ -1.51
TRPC1P48995 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
TRPC1P48995 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.59□□□□□ -1.51
TRPC1P48995 SMG1P6-201ENST00000532337 2930 ntBASIC5.59□□□□□ -1.51
TRPC1P48995 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRPC1P48995 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
TRPC1P48995 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.59□□□□□ -1.52
TRPC1P48995 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRPC1P48995 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRPC1P48995 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
TRPC1P48995 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.58□□□□□ -1.52
TRPC1P48995 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.58□□□□□ -1.52
TRPC1P48995 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRPC1P48995 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRPC1P48995 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms