Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.48□□□□□ -1.53
CXCL12P48061 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CXCL12P48061 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 AC005224.3-201ENST00000584683 2140 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.47□□□□□ -1.53
CXCL12P48061 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.47□□□□□ -1.53
CXCL12P48061 GAPDHP25-201ENST00000447061 1001 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 snoU13.20-201ENST00000459180 104 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 AC092324.1-201ENST00000468671 324 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 RN7SL738P-201ENST00000470264 297 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 RN7SL205P-201ENST00000490174 284 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.47□□□□□ -1.53
CXCL12P48061 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.47□□□□□ -1.53
CXCL12P48061 AC137768.1-201ENST00000549998 553 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.47□□□□□ -1.53
CXCL12P48061 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CXCL12P48061 NMNAT1P5-201ENST00000559657 841 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 DHFRP1-201ENST00000579682 559 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 RN7SL52P-201ENST00000584271 284 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.47□□□□□ -1.53
CXCL12P48061 AC137695.1-201ENST00000604126 489 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 AC087783.2-201ENST00000605070 562 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 RN7SL722P-201ENST00000617780 284 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 RN7SL565P-201ENST00000618246 284 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 AC091905.4-201ENST00000623432 202 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 AC063923.1-201ENST00000478982 1619 ntBASIC5.47□□□□□ -1.53
CXCL12P48061 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.47□□□□□ -1.53
CXCL12P48061 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
CXCL12P48061 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CXCL12P48061 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CXCL12P48061 HSPA8P14-201ENST00000552265 1805 ntBASIC5.46□□□□□ -1.53
CXCL12P48061 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CXCL12P48061 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CXCL12P48061 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CXCL12P48061 PABPC1P8-201ENST00000452851 2086 ntBASIC5.46□□□□□ -1.53
CXCL12P48061 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CXCL12P48061 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CXCL12P48061 CASC19-221ENST00000641309 1382 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 AC239868.2-201ENST00000564237 4527 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CXCL12P48061 SNORD1C-201ENST00000363315 78 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 RNA5SP91-201ENST00000390902 119 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.46□□□□□ -1.54
CXCL12P48061 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CXCL12P48061 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.46□□□□□ -1.54
CXCL12P48061 EIF2S2P3-201ENST00000428356 999 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 USP9YP9-201ENST00000429406 715 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.46□□□□□ -1.54
CXCL12P48061 TMEM183AP1-205ENST00000432739 290 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.46□□□□□ -1.54
CXCL12P48061 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.46□□□□□ -1.54
CXCL12P48061 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.46□□□□□ -1.54
CXCL12P48061 AC068522.1-201ENST00000482895 345 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 TRBV5-2-201ENST00000489095 273 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.46□□□□□ -1.54
CXCL12P48061 RNA5SP116-201ENST00000516132 98 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.46□□□□□ -1.54
CXCL12P48061 AP005403.1-201ENST00000579720 229 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 AC011487.3-201ENST00000593607 453 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 AL513327.3-201ENST00000602618 469 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 AL022394.1-201ENST00000606979 292 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 uc_338.18-201ENST00000615451 175 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 AC063952.1-203ENST00000634410 658 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 MAPK10-350ENST00000641777 965 ntBASIC5.46□□□□□ -1.54
CXCL12P48061 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.46□□□□□ -1.54
CXCL12P48061 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.46□□□□□ -1.54
CXCL12P48061 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CXCL12P48061 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CXCL12P48061 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 AC144833.1-201ENST00000567953 4089 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 INTS6P1-201ENST00000504674 2530 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms