Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 OR5AM1P-201ENST00000532136 1032 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 AC084824.2-201ENST00000548906 345 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HOXD13P35453 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 AC010547.6-201ENST00000571789 193 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXD13P35453 SNORD39.2-201ENST00000579995 76 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 AL360012.1-201ENST00000602813 131 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 BX322635.1-201ENST00000605804 496 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXD13P35453 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.12□□□□□ -1.43
HOXD13P35453 AL139254.3-201ENST00000641097 674 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
HOXD13P35453 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 AL442128.2-201ENST00000620246 1824 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 AC010132.2-201ENST00000295493 1043 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXD13P35453 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 OR6D1P-201ENST00000436165 939 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AC002504.1-201ENST00000438281 691 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 TXNP2-201ENST00000443918 295 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 LINC02210-201ENST00000444561 288 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 AL035090.1-201ENST00000454835 332 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 RN7SL273P-201ENST00000481561 299 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 ATP5LP5-201ENST00000483050 299 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 AC021106.1-201ENST00000509020 1058 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 PMS2P3-207ENST00000529061 717 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXD13P35453 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD13P35453 OR51C1P-201ENST00000608504 942 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 RNA5SP440-201ENST00000612665 119 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD13P35453 AL390318.1-201ENST00000624564 687 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 AC005618.4-201ENST00000625053 554 ntBASIC6.11□□□□□ -1.43
HOXD13P35453 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXD13P35453 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
HOXD13P35453 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
HOXD13P35453 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD13P35453 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 LINC01963-201ENST00000562038 3148 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC093671.1-201ENST00000624981 2929 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 AC010401.2-201ENST00000575137 4934 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 RN7SKP186-201ENST00000365371 303 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 SNORA16A-201ENST00000384342 137 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 MT-RNR1-201ENST00000389680 954 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXD13P35453 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 ST13P16-201ENST00000401760 781 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms