Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 AC073464.3-201ENST00000422564 712 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 BX119321.1-201ENST00000428912 797 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD12P35452 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD12P35452 AL157884.3-201ENST00000448273 1184 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
HOXD12P35452 YWHAEP1-201ENST00000453697 763 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 RANP2-201ENST00000456833 229 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD12P35452 CYCSP22-201ENST00000517555 339 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AC020937.1-201ENST00000519677 1013 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AP000859.1-201ENST00000525536 307 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 EIF4A2P5-201ENST00000529914 499 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXD12P35452 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
HOXD12P35452 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 MIR4776-2-201ENST00000580204 80 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
HOXD12P35452 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 AC005776.1-201ENST00000603164 290 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AC026979.4-201ENST00000606555 645 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AL445647.2-201ENST00000615170 130 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AC016957.2-201ENST00000616998 848 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 AC006840.1-201ENST00000623069 542 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXD12P35452 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 AL606537.1-201ENST00000607258 2011 ntBASIC6.08□□□□□ -1.44
HOXD12P35452 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD12P35452 GNL2P1-201ENST00000451274 2190 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AP002370.1-201ENST00000528055 1602 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
HOXD12P35452 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD12P35452 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD12P35452 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD12P35452 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD12P35452 TMSB4XP2-201ENST00000335179 210 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXD12P35452 MIR105-2-201ENST00000385083 81 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD12P35452 MTCYBP7-201ENST00000419540 1134 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AC093155.2-201ENST00000420734 937 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AC007568.1-201ENST00000422912 471 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AC073508.1-201ENST00000428866 656 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 AP000281.1-201ENST00000444036 316 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AL445466.1-201ENST00000448432 357 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXD12P35452 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 UBFD1P1-201ENST00000473259 814 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC008429.4-201ENST00000521201 182 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC016180.1-201ENST00000567945 403 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXD12P35452 AL953862.2-201ENST00000603089 820 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC034229.4-201ENST00000607861 441 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 AC019131.2-201ENST00000609071 870 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AL137246.2-201ENST00000613439 662 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD12P35452 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.07□□□□□ -1.44
HOXD12P35452 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD12P35452 OR7A1P-202ENST00000641542 1158 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms