Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Z83820.1-201ENST00000456978 1499 ntBASIC5.39□□□□□ -1.55
RORAP35398 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 MFSD8-239ENST00000641590 2479 ntBASIC5.39□□□□□ -1.55
RORAP35398 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
RORAP35398 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RORAP35398 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 RPL11P3-201ENST00000395256 523 ntBASIC5.39□□□□□ -1.55
RORAP35398 GAPDHP42-201ENST00000406848 981 ntBASIC5.39□□□□□ -1.55
RORAP35398 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 NPM1P4-201ENST00000414095 812 ntBASIC5.39□□□□□ -1.55
RORAP35398 AC010740.1-201ENST00000417035 684 ntBASIC5.39□□□□□ -1.55
RORAP35398 BMS1P13-201ENST00000417301 885 ntBASIC5.39□□□□□ -1.55
RORAP35398 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.39□□□□□ -1.55
RORAP35398 VN1R21P-201ENST00000426703 765 ntBASIC5.39□□□□□ -1.55
RORAP35398 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.39□□□□□ -1.55
RORAP35398 AL390119.1-201ENST00000440329 312 ntBASIC5.39□□□□□ -1.55
RORAP35398 OR7E116P-201ENST00000448529 957 ntBASIC5.39□□□□□ -1.55
RORAP35398 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 RSU1P1-201ENST00000453416 441 ntBASIC5.39□□□□□ -1.55
RORAP35398 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.39□□□□□ -1.55
RORAP35398 LDHBP2-201ENST00000456969 1005 ntBASIC5.39□□□□□ -1.55
RORAP35398 SIAH1P1-201ENST00000479411 923 ntBASIC5.39□□□□□ -1.55
RORAP35398 MORF4L2P1-201ENST00000503761 858 ntBASIC5.39□□□□□ -1.55
RORAP35398 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.39□□□□□ -1.55
RORAP35398 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.39□□□□□ -1.55
RORAP35398 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.39□□□□□ -1.55
RORAP35398 AP001357.1-201ENST00000586304 1053 ntBASIC5.39□□□□□ -1.55
RORAP35398 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.39□□□□□ -1.55
RORAP35398 AL513327.3-201ENST00000602618 469 ntBASIC5.39□□□□□ -1.55
RORAP35398 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 AL133481.2-203ENST00000607558 139 ntBASIC5.39□□□□□ -1.55
RORAP35398 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.39□□□□□ -1.55
RORAP35398 AC007204.2-201ENST00000615022 616 ntBASIC5.39□□□□□ -1.55
RORAP35398 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.39□□□□□ -1.55
RORAP35398 AC138965.3-201ENST00000623875 498 ntBASIC5.39□□□□□ -1.55
RORAP35398 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 AC109446.4-201ENST00000623235 2755 ntBASIC5.39□□□□□ -1.55
RORAP35398 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.38□□□□□ -1.55
RORAP35398 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.38□□□□□ -1.55
RORAP35398 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.38□□□□□ -1.55
RORAP35398 SNORA5.1-201ENST00000384275 131 ntBASIC5.38□□□□□ -1.55
RORAP35398 MIR130A-201ENST00000385274 89 ntBASIC5.38□□□□□ -1.55
RORAP35398 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RORAP35398 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RORAP35398 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.38□□□□□ -1.55
RORAP35398 AL133173.1-201ENST00000423458 397 ntBASIC5.38□□□□□ -1.55
RORAP35398 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.38□□□□□ -1.55
RORAP35398 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RORAP35398 AL450023.1-201ENST00000450868 751 ntBASIC5.38□□□□□ -1.55
RORAP35398 MEMO1P4-201ENST00000453590 386 ntBASIC5.38□□□□□ -1.55
RORAP35398 AC110749.1-201ENST00000462007 357 ntBASIC5.38□□□□□ -1.55
RORAP35398 AL133445.1-201ENST00000467051 452 ntBASIC5.38□□□□□ -1.55
RORAP35398 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.38□□□□□ -1.55
RORAP35398 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.38□□□□□ -1.55
RORAP35398 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.38□□□□□ -1.55
RORAP35398 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RORAP35398 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 NPM1P42-201ENST00000560329 862 ntBASIC5.38□□□□□ -1.55
RORAP35398 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.38□□□□□ -1.55
RORAP35398 AC007066.2-202ENST00000566531 914 ntBASIC5.38□□□□□ -1.55
RORAP35398 RBM22P12-201ENST00000567098 1255 ntBASIC5.38□□□□□ -1.55
RORAP35398 AC015720.2-201ENST00000567709 334 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms