Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
COL4A5P29400 Z98755.1-201ENST00000407015 1384 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A5P29400 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A5P29400 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
COL4A5P29400 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A5P29400 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A5P29400 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.31□□□□□ -1.4
COL4A5P29400 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL4A5P29400 RN7SKP100-201ENST00000411258 284 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 AC004690.1-201ENST00000418216 328 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 BX323845.1-201ENST00000432417 179 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 FTH1P8-201ENST00000498161 514 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 AC034205.1-201ENST00000520621 638 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.31□□□□□ -1.4
COL4A5P29400 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.31□□□□□ -1.4
COL4A5P29400 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A5P29400 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A5P29400 BGLT3-201ENST00000564523 994 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 AC233699.1-201ENST00000569955 1168 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A5P29400 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A5P29400 AC020910.2-201ENST00000603635 610 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A5P29400 AC005252.1-201ENST00000604518 1063 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 AL353729.2-201ENST00000605859 1249 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 AC123769.2-201ENST00000624332 5984 ntBASIC6.31□□□□□ -1.4
COL4A5P29400 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL4A5P29400 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A5P29400 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
COL4A5P29400 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
COL4A5P29400 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 UGT2B24P-201ENST00000514441 1597 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A5P29400 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A5P29400 RNA5SP90-201ENST00000364801 99 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 RNA5SP479-201ENST00000364858 117 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 AP002530.1-201ENST00000405705 684 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A5P29400 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 CNOT7P1-201ENST00000429006 852 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A5P29400 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 AC091042.1-201ENST00000579213 173 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
COL4A5P29400 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 NBPF8-201ENST00000583271 5330 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A5P29400 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A5P29400 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL4A5P29400 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A5P29400 SCARNA20.4-201ENST00000516969 131 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A5P29400 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A5P29400 AC105254.2-201ENST00000603636 436 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 AL391358.1-201ENST00000605342 190 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 AC244107.2-201ENST00000611773 76 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 AC012414.7-202ENST00000622705 1090 ntBASIC6.3□□□□□ -1.4
COL4A5P29400 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL4A5P29400 BX284613.1-201ENST00000452221 1641 ntBASIC6.29□□□□□ -1.4
COL4A5P29400 LPP-208ENST00000448637 5835 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A5P29400 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A5P29400 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A5P29400 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL4A5P29400 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A5P29400 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms