Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.84□□□□□ -1.48
CD40P25942 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.84□□□□□ -1.48
CD40P25942 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
CD40P25942 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.84□□□□□ -1.48
CD40P25942 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.48
CD40P25942 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.84□□□□□ -1.48
CD40P25942 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.84□□□□□ -1.48
CD40P25942 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CD40P25942 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CD40P25942 Z93929.1-201ENST00000418200 1475 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC217777.1-201ENST00000570034 1471 ntBASIC5.83□□□□□ -1.48
CD40P25942 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.83□□□□□ -1.48
CD40P25942 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD40P25942 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD40P25942 RNA5SP65-201ENST00000363166 119 ntBASIC5.83□□□□□ -1.48
CD40P25942 RNA5SP140-201ENST00000364524 92 ntBASIC5.83□□□□□ -1.48
CD40P25942 SNORA70.3-201ENST00000365075 132 ntBASIC5.83□□□□□ -1.48
CD40P25942 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 RPS3AP26-201ENST00000398259 784 ntBASIC5.83□□□□□ -1.48
CD40P25942 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 RNA5SP80-201ENST00000410475 111 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.83□□□□□ -1.48
CD40P25942 MRPS36P1-201ENST00000421291 307 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC019178.2-201ENST00000423595 505 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC239367.3-201ENST00000428996 814 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 AC010153.1-201ENST00000432862 727 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC098826.1-201ENST00000433943 471 ntBASIC5.83□□□□□ -1.48
CD40P25942 USP9YP22-201ENST00000438971 294 ntBASIC5.83□□□□□ -1.48
CD40P25942 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.83□□□□□ -1.48
CD40P25942 AL606662.1-201ENST00000445763 553 ntBASIC5.83□□□□□ -1.48
CD40P25942 AL935212.3-201ENST00000450729 284 ntBASIC5.83□□□□□ -1.48
CD40P25942 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 AL133351.3-201ENST00000454998 193 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC099670.1-201ENST00000455141 783 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.83□□□□□ -1.48
CD40P25942 BX248409.1-201ENST00000455497 255 ntBASIC5.83□□□□□ -1.48
CD40P25942 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 AC005165.2-201ENST00000466070 380 ntBASIC5.83□□□□□ -1.48
CD40P25942 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 DYNLL1P6-201ENST00000503440 264 ntBASIC5.83□□□□□ -1.48
CD40P25942 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC073358.1-201ENST00000505671 684 ntBASIC5.83□□□□□ -1.48
CD40P25942 AL390198.2-201ENST00000510553 222 ntBASIC5.83□□□□□ -1.48
CD40P25942 MTCYBP37-201ENST00000510642 1133 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC010587.2-201ENST00000511727 448 ntBASIC5.83□□□□□ -1.48
CD40P25942 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 MTATP6P1-201ENST00000514057 681 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 AC105185.1-201ENST00000518705 535 ntBASIC5.83□□□□□ -1.48
CD40P25942 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.83□□□□□ -1.48
CD40P25942 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.83□□□□□ -1.48
CD40P25942 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.83□□□□□ -1.48
CD40P25942 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD40P25942 UBE2NP1-201ENST00000545592 458 ntBASIC5.83□□□□□ -1.48
CD40P25942 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.83□□□□□ -1.48
CD40P25942 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 RN7SL366P-201ENST00000577957 292 ntBASIC5.83□□□□□ -1.48
CD40P25942 RN7SL199P-201ENST00000578752 281 ntBASIC5.83□□□□□ -1.48
CD40P25942 RN7SL656P-201ENST00000579044 281 ntBASIC5.83□□□□□ -1.48
CD40P25942 RN7SL404P-201ENST00000582421 281 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 RPL29P33-201ENST00000587474 316 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 AC091133.5-201ENST00000603088 301 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.83□□□□□ -1.48
CD40P25942 AC131235.4-201ENST00000609288 620 ntBASIC5.83□□□□□ -1.48
CD40P25942 AC013562.2-201ENST00000611632 603 ntBASIC5.83□□□□□ -1.48
CD40P25942 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.83□□□□□ -1.48
CD40P25942 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.83□□□□□ -1.48
CD40P25942 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.83□□□□□ -1.48
CD40P25942 AC005840.5-201ENST00000619166 599 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms