Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAB5AP20339 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAB5AP20339 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.25□□□□□ -1.73
RAB5AP20339 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RAB5AP20339 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RAB5AP20339 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 IL6STP1-201ENST00000346911 1020 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 RN7SKP1-201ENST00000365525 307 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RAB5AP20339 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 VDAC2P1-201ENST00000399358 958 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AC233289.1-201ENST00000403700 508 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 RN7SKP144-201ENST00000411108 279 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 CLIC4P3-201ENST00000422221 752 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 RPS26P4-201ENST00000431743 355 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 AL450263.2-201ENST00000439400 589 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 SOCS5P1-201ENST00000440415 949 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 OR7E116P-201ENST00000448529 957 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AL121578.2-201ENST00000448797 447 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AC016027.4-201ENST00000450866 277 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC002553.2-201ENST00000453217 340 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 RPS12P20-201ENST00000464109 380 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 CBX1P5-201ENST00000475330 559 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 RPL23AP37-201ENST00000479658 549 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AF305872.1-201ENST00000485217 471 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 KHDC1P1-201ENST00000511053 508 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 RNA5SP418-201ENST00000515951 117 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.24□□□□□ -1.73
RAB5AP20339 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.24□□□□□ -1.73
RAB5AP20339 CD24P2-201ENST00000565486 219 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 MTND2P13-201ENST00000577438 1039 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AC090774.2-201ENST00000584708 322 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AC124856.1-201ENST00000600819 896 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AC097505.1-201ENST00000610199 565 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AL589743.6-201ENST00000611025 117 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 AC244517.3-201ENST00000616254 1235 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.24□□□□□ -1.73
RAB5AP20339 AC097461.1-201ENST00000568928 2821 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.24□□□□□ -1.73
RAB5AP20339 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 AC079298.1-201ENST00000625026 1619 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.24□□□□□ -1.73
RAB5AP20339 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAB5AP20339 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.23□□□□□ -1.73
RAB5AP20339 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RAB5AP20339 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
RAB5AP20339 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.23□□□□□ -1.73
RAB5AP20339 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.23□□□□□ -1.73
RAB5AP20339 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RAB5AP20339 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAB5AP20339 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RAB5AP20339 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAB5AP20339 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RAB5AP20339 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAB5AP20339 RN7SKP191-201ENST00000364713 306 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.23□□□□□ -1.73
RAB5AP20339 MT-RNR1-201ENST00000389680 954 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 ARSFP1-201ENST00000398758 477 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 EEF1GP6-201ENST00000402309 905 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.23□□□□□ -1.73
RAB5AP20339 AL096829.1-201ENST00000413677 457 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 RPS4XP5-201ENST00000419038 768 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 THEM7P-201ENST00000419556 672 ntBASIC4.23□□□□□ -1.73
RAB5AP20339 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms