Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 SNORD125-201ENST00000459538 96 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ATP5LP5-201ENST00000483050 299 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC008676.3-201ENST00000521237 435 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC136777.2-201ENST00000522979 358 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 HMGB1P42-201ENST00000532126 553 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC025857.2-201ENST00000602711 238 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC015922.4-201ENST00000612568 690 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AC015712.7-201ENST00000615211 635 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 AL356317.1-201ENST00000396110 1436 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 UGT2B24P-201ENST00000514441 1597 ntBASIC5.72□□□□□ -1.49
HLA-DPA1P20036 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
HLA-DPA1P20036 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DPA1P20036 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.71□□□□□ -1.49
HLA-DPA1P20036 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DPA1P20036 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DPA1P20036 AC093297.3-201ENST00000607056 2517 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AL121886.1-201ENST00000358609 435 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 SNORA64.1-201ENST00000362600 132 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 RNA5SP105-201ENST00000391123 113 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC073109.1-201ENST00000445066 978 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 RAB28P3-201ENST00000448325 597 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC016724.1-201ENST00000453215 421 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 RPS23P6-201ENST00000466136 431 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC147055.1-201ENST00000509261 750 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC018442.3-201ENST00000523025 183 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 OR8Q1P-201ENST00000526467 655 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 PMS2P3-207ENST00000529061 717 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 EIF4A2P5-201ENST00000529914 499 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 IGBP1P1-201ENST00000554337 1009 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 DPPA2P4-201ENST00000563717 878 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC122134.1-201ENST00000565664 1104 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 MIR4311-201ENST00000580794 100 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 FAM106CP-201ENST00000582212 507 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC004241.3-201ENST00000611728 517 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC107905.1-201ENST00000616204 426 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC006840.1-201ENST00000623069 542 ntBASIC5.71□□□□□ -1.5
HLA-DPA1P20036 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DPA1P20036 AC083837.1-201ENST00000565297 2994 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 RNA5SP122-201ENST00000384457 108 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 MT-RNR1-201ENST00000389680 954 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC005042.1-201ENST00000393397 800 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 RPS6P23-201ENST00000413224 722 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC113412.1-201ENST00000425840 504 ntBASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DPA1P20036 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms