Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.54□□□□□ -1.52
XRCC1P18887 MAPK10-338ENST00000641647 3362 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
XRCC1P18887 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.54□□□□□ -1.52
XRCC1P18887 U3.25-201ENST00000391209 220 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 NACAP7-201ENST00000407371 609 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 SNORA81-201ENST00000408493 178 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.54□□□□□ -1.52
XRCC1P18887 OR6E1P-201ENST00000414424 923 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.54□□□□□ -1.52
XRCC1P18887 AC009784.1-201ENST00000426484 460 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.54□□□□□ -1.52
XRCC1P18887 BTG3P1-201ENST00000435859 716 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 RN7SL72P-201ENST00000460697 269 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 SNORA70.11-201ENST00000515987 138 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 SNORA70.13-201ENST00000516116 138 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.54□□□□□ -1.52
XRCC1P18887 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.54□□□□□ -1.52
XRCC1P18887 MIR3176-201ENST00000582210 90 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.54□□□□□ -1.52
XRCC1P18887 AP000894.4-201ENST00000610185 483 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 AL162574.1-201ENST00000615702 950 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 AC114786.1-201ENST00000512892 1415 ntBASIC5.54□□□□□ -1.52
XRCC1P18887 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.54□□□□□ -1.52
XRCC1P18887 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 AC097063.1-201ENST00000426714 1797 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
XRCC1P18887 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 RNA5SP132-201ENST00000364725 118 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 RNA5SP30-201ENST00000365552 115 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 MIR130A-201ENST00000385274 89 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 OR3A2-201ENST00000408891 1076 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 RNGTTP1-201ENST00000420965 728 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 FMO7P-201ENST00000436045 768 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 MEMO1P4-201ENST00000453590 386 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 AC090589.1-201ENST00000473109 362 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.53□□□□□ -1.52
XRCC1P18887 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.53□□□□□ -1.52
XRCC1P18887 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 AC020633.1-201ENST00000468439 2247 ntBASIC5.53□□□□□ -1.52
XRCC1P18887 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.53□□□□□ -1.52
XRCC1P18887 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
XRCC1P18887 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
XRCC1P18887 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
XRCC1P18887 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.52□□□□□ -1.53
XRCC1P18887 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
XRCC1P18887 RN7SKP124-201ENST00000364730 341 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 RN7SKP229-201ENST00000410465 302 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 OR10T1P-201ENST00000424327 947 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 AL136231.1-201ENST00000429407 730 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 AL359265.1-201ENST00000440296 795 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 334.1 ms