Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AL136231.1-201ENST00000429407 730 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 KCTD9P1-201ENST00000430462 1167 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 RPL19P16-201ENST00000433839 588 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AL138899.2-201ENST00000439139 499 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 AC064862.4-201ENST00000442180 334 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 RPL36AP39-201ENST00000445859 318 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 AP000797.2-201ENST00000475768 606 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 RPS26P24-201ENST00000497656 331 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 AP004607.2-201ENST00000533949 322 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.79□□□□□ -1.64
CTLA4P16410 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 NDUFA5P11-201ENST00000567995 343 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 RN7SL356P-201ENST00000582228 248 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 AL022394.1-201ENST00000606979 292 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 MIR6778-201ENST00000617912 73 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AC026367.3-201ENST00000619032 590 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AC241377.1-201ENST00000619797 406 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.79□□□□□ -1.64
CTLA4P16410 AC132068.1-201ENST00000623805 459 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.79□□□□□ -1.64
CTLA4P16410 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
CTLA4P16410 AC012078.1-201ENST00000405035 1646 ntBASIC4.79□□□□□ -1.64
CTLA4P16410 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.79□□□□□ -1.64
CTLA4P16410 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTLA4P16410 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.78□□□□□ -1.64
CTLA4P16410 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 GABARAPL3-201ENST00000412799 354 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 SRSF1P1-201ENST00000424058 520 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 VTI1BP4-201ENST00000427516 527 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 MTND6P12-201ENST00000428247 522 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 GSTM5P1-201ENST00000434751 660 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 RPL23AP19-201ENST00000436229 369 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 AL672138.1-201ENST00000450604 1015 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 OR52E7P-201ENST00000452394 933 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 AC093827.1-201ENST00000480094 861 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.78□□□□□ -1.64
CTLA4P16410 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 IMPA1P1-201ENST00000510718 842 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 SCARNA16.4-201ENST00000516956 187 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 RN7SKP99-201ENST00000517028 307 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AC078878.1-201ENST00000539832 958 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.78□□□□□ -1.64
CTLA4P16410 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 MIR4505-201ENST00000582238 73 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.78□□□□□ -1.64
CTLA4P16410 AC009027.1-201ENST00000604510 479 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AP003400.3-201ENST00000624904 346 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.78□□□□□ -1.64
CTLA4P16410 AP000550.3-201ENST00000637734 379 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 AC079298.1-201ENST00000625026 1619 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
CTLA4P16410 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 RNF19BPY-201ENST00000458209 1550 ntBASIC4.78□□□□□ -1.64
CTLA4P16410 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTLA4P16410 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.78□□□□□ -1.64
CTLA4P16410 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTLA4P16410 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CTLA4P16410 AP000432.2-201ENST00000624164 2048 ntBASIC4.77□□□□□ -1.65
CTLA4P16410 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms