Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TNPO1P1-201ENST00000423641 1138 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AC000089.1-201ENST00000424559 801 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 UBE2D3P4-201ENST00000441973 436 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC016772.1-201ENST00000444170 1261 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AL158214.1-201ENST00000444423 404 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 ELOCP30-201ENST00000447108 299 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 ST13P21-201ENST00000453250 1098 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 MARK2P8-201ENST00000476069 952 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AC022415.1-202ENST00000486612 523 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.41□□□□□ -1.38
COL6A2P12110 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 AC093815.1-201ENST00000508637 280 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 UGT2A3P7-201ENST00000510485 734 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC093878.1-201ENST00000515630 432 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 RFPL1S-203ENST00000539579 330 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.41□□□□□ -1.38
COL6A2P12110 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC135507.1-201ENST00000607214 561 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL6A2P12110 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 MTND4P4-201ENST00000439033 1366 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL6A2P12110 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL6A2P12110 AC095038.1-201ENST00000429248 1591 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.4□□□□□ -1.38
COL6A2P12110 HSPD1P8-201ENST00000400121 1658 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL6A2P12110 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.4□□□□□ -1.38
COL6A2P12110 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
COL6A2P12110 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL6A2P12110 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL6A2P12110 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.4□□□□□ -1.38
COL6A2P12110 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL6A2P12110 MIR187-201ENST00000385062 109 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AL360271.1-201ENST00000395679 510 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 U3.43-201ENST00000410734 213 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.4□□□□□ -1.38
COL6A2P12110 MICG-208ENST00000416822 132 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 Z75741.2-201ENST00000417272 1167 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.4□□□□□ -1.38
COL6A2P12110 TIMM9P2-201ENST00000419324 266 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AHCYP8-201ENST00000425108 209 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 HIGD1AP12-201ENST00000427832 281 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.4□□□□□ -1.38
COL6A2P12110 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.4□□□□□ -1.38
COL6A2P12110 AL022237.1-201ENST00000446663 358 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.4□□□□□ -1.38
COL6A2P12110 AC233982.1-201ENST00000451247 436 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 OSTCP1-201ENST00000455507 450 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AC069528.1-202ENST00000482888 637 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AC114728.1-201ENST00000488289 483 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 RPL5P14-201ENST00000494197 878 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 RPL10P7-201ENST00000495649 625 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.4□□□□□ -1.38
COL6A2P12110 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.4□□□□□ -1.38
COL6A2P12110 AC073648.3-201ENST00000504939 925 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 MTCYBP16-201ENST00000509187 1129 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.4□□□□□ -1.38
COL6A2P12110 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.4□□□□□ -1.38
COL6A2P12110 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.4□□□□□ -1.38
COL6A2P12110 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.4□□□□□ -1.38
COL6A2P12110 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.4□□□□□ -1.38
COL6A2P12110 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.4□□□□□ -1.38
COL6A2P12110 AP004607.5-201ENST00000532034 217 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 OR9G2P-201ENST00000533326 880 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 PDCL2P2-201ENST00000533651 189 ntBASIC6.4□□□□□ -1.38
COL6A2P12110 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
COL6A2P12110 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms