Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
TOP2AP11388 MAK-202ENST00000354489 3941 ntTSL 5 BASIC9.21□□□□□ -0.94
TOP2AP11388 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOP2AP11388 AC144833.1-201ENST00000567953 4089 ntBASIC9.21□□□□□ -0.94
TOP2AP11388 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOP2AP11388 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TOP2AP11388 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TOP2AP11388 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TOP2AP11388 GNG5P2-201ENST00000372054 207 ntBASIC9.21□□□□□ -0.94
TOP2AP11388 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9.21□□□□□ -0.94
TOP2AP11388 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.21□□□□□ -0.94
TOP2AP11388 AC124944.2-201ENST00000429866 1242 ntBASIC9.21□□□□□ -0.94
TOP2AP11388 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC9.21□□□□□ -0.94
TOP2AP11388 REG1CP-206ENST00000447469 496 ntBASIC9.21□□□□□ -0.94
TOP2AP11388 RN7SL814P-201ENST00000487715 300 ntBASIC9.21□□□□□ -0.94
TOP2AP11388 C1GALT1P3-201ENST00000522049 819 ntBASIC9.21□□□□□ -0.94
TOP2AP11388 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC9.21□□□□□ -0.94
TOP2AP11388 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC9.21□□□□□ -0.94
TOP2AP11388 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOP2AP11388 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC9.2□□□□□ -0.94
TOP2AP11388 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TOP2AP11388 AC079097.1-201ENST00000512187 1399 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
TOP2AP11388 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
TOP2AP11388 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOP2AP11388 DNAJA1P3-201ENST00000399417 1194 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 RPL10P10-201ENST00000403509 664 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 EIF2S2P3-201ENST00000428356 999 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 NOP56P2-201ENST00000447491 769 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC9.2□□□□□ -0.94
TOP2AP11388 RN7SKP260-201ENST00000516907 149 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC9.2□□□□□ -0.94
TOP2AP11388 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TOP2AP11388 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC9.2□□□□□ -0.94
TOP2AP11388 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC9.2□□□□□ -0.94
TOP2AP11388 AC015712.7-201ENST00000615211 635 ntBASIC9.2□□□□□ -0.94
TOP2AP11388 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC9.2□□□□□ -0.94
TOP2AP11388 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC9.2□□□□□ -0.94
TOP2AP11388 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TOP2AP11388 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC9.19□□□□□ -0.94
TOP2AP11388 RPS4XP9-201ENST00000405151 780 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.19□□□□□ -0.94
TOP2AP11388 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC9.19□□□□□ -0.94
TOP2AP11388 RPL5P25-201ENST00000441148 775 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 RBMY2TP-201ENST00000451162 947 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 FTH1P2-201ENST00000466086 412 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 HMGN2P25-201ENST00000486956 268 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TOP2AP11388 MIR6780A-201ENST00000615089 68 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 AL731566.2-201ENST00000618971 317 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 AC069542.2-201ENST00000624816 216 ntBASIC9.19□□□□□ -0.94
TOP2AP11388 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TOP2AP11388 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TOP2AP11388 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
TOP2AP11388 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TOP2AP11388 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.18□□□□□ -0.94
TOP2AP11388 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TOP2AP11388 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TOP2AP11388 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
TOP2AP11388 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC9.18□□□□□ -0.94
TOP2AP11388 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC9.18□□□□□ -0.94
TOP2AP11388 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TOP2AP11388 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
TOP2AP11388 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC9.18□□□□□ -0.94
TOP2AP11388 RNU1-32P-201ENST00000363937 159 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
TOP2AP11388 RNU1-74P-201ENST00000384108 171 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 MIR600-201ENST00000385007 98 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 GAPDHP15-201ENST00000398586 975 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 RNA5SP113-201ENST00000410486 84 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 BX323845.1-201ENST00000432417 179 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 AC073465.2-201ENST00000440938 498 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 AL354714.3-201ENST00000447284 493 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC9.18□□□□□ -0.94
TOP2AP11388 AC097173.1-201ENST00000505862 819 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.18□□□□□ -0.94
TOP2AP11388 MIR3667-201ENST00000581025 74 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 AL161616.1-201ENST00000611867 286 ntBASIC9.18□□□□□ -0.94
TOP2AP11388 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC9.18□□□□□ -0.94
TOP2AP11388 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOP2AP11388 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
TOP2AP11388 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC9.18□□□□□ -0.94
TOP2AP11388 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOP2AP11388 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOP2AP11388 AC079741.1-201ENST00000321498 212 ntBASIC9.17□□□□□ -0.94
TOP2AP11388 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
TOP2AP11388 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC9.17□□□□□ -0.94
TOP2AP11388 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.17□□□□□ -0.94
TOP2AP11388 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC9.17□□□□□ -0.94
TOP2AP11388 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC9.17□□□□□ -0.94
TOP2AP11388 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC9.17□□□□□ -0.94
TOP2AP11388 RN7SL690P-201ENST00000582087 240 ntBASIC9.17□□□□□ -0.94
TOP2AP11388 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOP2AP11388 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC9.17□□□□□ -0.94
TOP2AP11388 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC9.17□□□□□ -0.94
TOP2AP11388 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC9.17□□□□□ -0.94
TOP2AP11388 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOP2AP11388 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC9.17□□□□□ -0.94
TOP2AP11388 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms