Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 WBP1LP8-201ENST00000617401 327 ntBASIC6.19□□□□□ -1.42
MMP3P08254 AC020978.9-201ENST00000624380 1141 ntBASIC6.19□□□□□ -1.42
MMP3P08254 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
MMP3P08254 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.19□□□□□ -1.42
MMP3P08254 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MMP3P08254 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.19□□□□□ -1.42
MMP3P08254 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP3P08254 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.18□□□□□ -1.42
MMP3P08254 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.18□□□□□ -1.42
MMP3P08254 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.18□□□□□ -1.42
MMP3P08254 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MMP3P08254 SNORA16A-201ENST00000384342 137 ntBASIC6.18□□□□□ -1.42
MMP3P08254 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.18□□□□□ -1.42
MMP3P08254 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.18□□□□□ -1.42
MMP3P08254 AC108075.1-201ENST00000424692 529 ntBASIC6.18□□□□□ -1.42
MMP3P08254 DSTNP5-201ENST00000427921 523 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AC005033.1-201ENST00000428904 813 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.18□□□□□ -1.42
MMP3P08254 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.18□□□□□ -1.42
MMP3P08254 AC073410.1-201ENST00000435125 589 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AL596266.1-201ENST00000448132 400 ntBASIC6.18□□□□□ -1.42
MMP3P08254 OTX2P1-201ENST00000450956 354 ntBASIC6.18□□□□□ -1.42
MMP3P08254 MTCYBP14-201ENST00000457471 715 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AC004453.1-201ENST00000487895 408 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.18□□□□□ -1.42
MMP3P08254 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.18□□□□□ -1.42
MMP3P08254 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.18□□□□□ -1.42
MMP3P08254 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 RBM22P1-201ENST00000578589 1214 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.18□□□□□ -1.42
MMP3P08254 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.18□□□□□ -1.42
MMP3P08254 AC005972.3-201ENST00000606304 481 ntBASIC6.18□□□□□ -1.42
MMP3P08254 AP002505.2-201ENST00000623585 696 ntBASIC6.18□□□□□ -1.42
MMP3P08254 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.18□□□□□ -1.42
MMP3P08254 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 MT-RNR2-201ENST00000387347 1559 ntBASIC6.18□□□□□ -1.42
MMP3P08254 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.18□□□□□ -1.42
MMP3P08254 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MMP3P08254 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
MMP3P08254 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 RNA5SP443-201ENST00000363083 132 ntBASIC6.17□□□□□ -1.42
MMP3P08254 RNA5SP251-201ENST00000410614 137 ntBASIC6.17□□□□□ -1.42
MMP3P08254 AC007161.1-204ENST00000423039 460 ntBASIC6.17□□□□□ -1.42
MMP3P08254 SETP10-201ENST00000424368 814 ntBASIC6.17□□□□□ -1.42
MMP3P08254 RPS6P14-201ENST00000425165 719 ntBASIC6.17□□□□□ -1.42
MMP3P08254 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.17□□□□□ -1.42
MMP3P08254 RPSAP50-201ENST00000481955 852 ntBASIC6.17□□□□□ -1.42
MMP3P08254 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 AC005899.7-201ENST00000618199 588 ntBASIC6.17□□□□□ -1.42
MMP3P08254 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MMP3P08254 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.17□□□□□ -1.42
MMP3P08254 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
MMP3P08254 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MMP3P08254 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 AL591135.1-201ENST00000401578 5914 ntBASIC6.17□□□□□ -1.42
MMP3P08254 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.17□□□□□ -1.42
MMP3P08254 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
MMP3P08254 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 AC020656.2-201ENST00000613291 5309 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms