Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC109583.2-201ENST00000617367 129 ntBASIC6.05□□□□□ -1.44
CHRNA1P02708 AC069542.2-201ENST00000624816 216 ntBASIC6.05□□□□□ -1.44
CHRNA1P02708 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.05□□□□□ -1.44
CHRNA1P02708 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.05□□□□□ -1.44
CHRNA1P02708 MAPK10-350ENST00000641777 965 ntBASIC6.05□□□□□ -1.44
CHRNA1P02708 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CHRNA1P02708 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.05□□□□□ -1.44
CHRNA1P02708 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CHRNA1P02708 MT-RNR2-201ENST00000387347 1559 ntBASIC6.05□□□□□ -1.44
CHRNA1P02708 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHRNA1P02708 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC011493.1-201ENST00000596753 1632 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 RNA5SP326-201ENST00000363209 110 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 RN7SKP125-201ENST00000410481 302 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 RN7SKP213-201ENST00000410746 298 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AL590762.4-201ENST00000425885 253 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 FAM96AP1-201ENST00000430879 482 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 USP24P1-201ENST00000433802 779 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 RPS18P6-201ENST00000476880 458 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.04□□□□□ -1.44
CHRNA1P02708 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC147055.3-201ENST00000510547 851 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.04□□□□□ -1.44
CHRNA1P02708 RNU6-941P-201ENST00000516346 108 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 RN7SKP253-201ENST00000516424 309 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC106730.2-201ENST00000566641 540 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC018809.2-201ENST00000602436 3823 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.04□□□□□ -1.44
CHRNA1P02708 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC011933.2-201ENST00000578539 2790 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.04□□□□□ -1.44
CHRNA1P02708 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 AC116158.1-201ENST00000560231 2129 ntBASIC6.04□□□□□ -1.44
CHRNA1P02708 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHRNA1P02708 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CHRNA1P02708 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CHRNA1P02708 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.03□□□□□ -1.44
CHRNA1P02708 AC068870.1-201ENST00000563737 2455 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHRNA1P02708 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHRNA1P02708 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CHRNA1P02708 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CHRNA1P02708 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.03□□□□□ -1.44
CHRNA1P02708 RNU1-106P-201ENST00000384382 164 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CHRNA1P02708 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 NANOGP9-201ENST00000439890 892 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 AL136455.1-201ENST00000441083 1240 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.03□□□□□ -1.44
CHRNA1P02708 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.03□□□□□ -1.44
CHRNA1P02708 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.03□□□□□ -1.44
CHRNA1P02708 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.03□□□□□ -1.44
CHRNA1P02708 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.03□□□□□ -1.44
CHRNA1P02708 ASNSP4-201ENST00000511103 447 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.03□□□□□ -1.44
CHRNA1P02708 AC022832.1-201ENST00000530718 645 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.03□□□□□ -1.44
CHRNA1P02708 AC087763.1-201ENST00000603391 286 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.03□□□□□ -1.44
CHRNA1P02708 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHRNA1P02708 AL031658.2-201ENST00000616850 651 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.03□□□□□ -1.44
CHRNA1P02708 AP001153.1-201ENST00000641024 338 ntBASIC6.03□□□□□ -1.44
CHRNA1P02708 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CHRNA1P02708 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHRNA1P02708 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHRNA1P02708 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHRNA1P02708 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
CHRNA1P02708 MSL3P1-202ENST00000440028 1468 ntBASIC6.02□□□□□ -1.44
CHRNA1P02708 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHRNA1P02708 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHRNA1P02708 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.02□□□□□ -1.45
CHRNA1P02708 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHRNA1P02708 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms