Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RPS18P6-201ENST00000476880 458 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC098799.1-201ENST00000504752 800 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 RPS4XP20-201ENST00000505751 772 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC091912.1-201ENST00000511351 248 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC134349.2-201ENST00000535136 910 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC092490.3-201ENST00000545370 572 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC015712.7-201ENST00000615211 635 ntBASIC6.33□□□□□ -1.4
COL2A1P02458 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
COL2A1P02458 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL2A1P02458 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.33□□□□□ -1.4
COL2A1P02458 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
COL2A1P02458 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.32□□□□□ -1.4
COL2A1P02458 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL2A1P02458 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
COL2A1P02458 AC002090.1-201ENST00000625000 2138 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 OR9K1P-202ENST00000641111 3217 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.32□□□□□ -1.4
COL2A1P02458 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.32□□□□□ -1.4
COL2A1P02458 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.32□□□□□ -1.4
COL2A1P02458 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL2A1P02458 U3.3-201ENST00000362986 216 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 EI24P4-201ENST00000423683 1078 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL2A1P02458 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.32□□□□□ -1.4
COL2A1P02458 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.32□□□□□ -1.4
COL2A1P02458 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.32□□□□□ -1.4
COL2A1P02458 MIR4480-201ENST00000582492 71 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL2A1P02458 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.32□□□□□ -1.4
COL2A1P02458 AC079414.3-201ENST00000612986 1090 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 AC010435.1-201ENST00000623353 1177 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 MTCO1P1-201ENST00000624263 1081 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.32□□□□□ -1.4
COL2A1P02458 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL2A1P02458 MFSD8-216ENST00000641147 4009 ntBASIC6.32□□□□□ -1.4
COL2A1P02458 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL2A1P02458 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
COL2A1P02458 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL2A1P02458 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
COL2A1P02458 AC092747.4-201ENST00000620519 1861 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 AC107980.1-201ENST00000558671 3355 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 SNURFL-201ENST00000309296 343 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 RN7SKP104-201ENST00000362605 328 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 AC245028.1-201ENST00000423259 256 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 AC058823.1-201ENST00000485315 474 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 AC083982.1-201ENST00000485679 344 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 GTF2F2P1-201ENST00000511083 675 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.31□□□□□ -1.4
COL2A1P02458 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 AC020937.1-201ENST00000519677 1013 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 AP002373.2-201ENST00000541631 1060 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.31□□□□□ -1.4
COL2A1P02458 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.31□□□□□ -1.4
COL2A1P02458 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.31□□□□□ -1.4
COL2A1P02458 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.31□□□□□ -1.4
COL2A1P02458 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
COL2A1P02458 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
COL2A1P02458 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.31□□□□□ -1.4
COL2A1P02458 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 AL359715.3-201ENST00000569267 2123 ntBASIC6.31□□□□□ -1.4
COL2A1P02458 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.31□□□□□ -1.4
COL2A1P02458 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL2A1P02458 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL2A1P02458 AL451142.1-201ENST00000375867 775 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.3□□□□□ -1.4
COL2A1P02458 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.3□□□□□ -1.4
COL2A1P02458 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.3□□□□□ -1.4
COL2A1P02458 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.3□□□□□ -1.4
COL2A1P02458 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.3□□□□□ -1.4
COL2A1P02458 EIF3KP3-201ENST00000514461 639 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.3□□□□□ -1.4
COL2A1P02458 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.3□□□□□ -1.4
COL2A1P02458 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.3□□□□□ -1.4
COL2A1P02458 AP001267.4-201ENST00000602598 545 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms