Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FAR2P1-206ENST00000449736 709 ntBASIC5.33□□□□□ -1.56
TNFP01375 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 AZGP1P2-201ENST00000454506 345 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC002075.1-201ENST00000457396 676 ntBASIC5.33□□□□□ -1.56
TNFP01375 RN7SL610P-201ENST00000463845 291 ntBASIC5.33□□□□□ -1.56
TNFP01375 RPL7P40-201ENST00000481703 745 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC004815.1-201ENST00000484185 331 ntBASIC5.33□□□□□ -1.56
TNFP01375 RPS17P5-201ENST00000498293 408 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFP01375 ST13P12-201ENST00000508958 1094 ntBASIC5.33□□□□□ -1.56
TNFP01375 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFP01375 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFP01375 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFP01375 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 AC106730.2-201ENST00000566641 540 ntBASIC5.33□□□□□ -1.56
TNFP01375 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFP01375 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.33□□□□□ -1.56
TNFP01375 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 AP002512.4-202ENST00000641599 4530 ntBASIC5.33□□□□□ -1.56
TNFP01375 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TNFP01375 AC011493.1-201ENST00000596753 1632 ntBASIC5.33□□□□□ -1.56
TNFP01375 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TNFP01375 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TNFP01375 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFP01375 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TNFP01375 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TNFP01375 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.32□□□□□ -1.56
TNFP01375 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFP01375 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 RNU1-43P-201ENST00000365052 165 ntBASIC5.32□□□□□ -1.56
TNFP01375 HSPA8P15-201ENST00000401676 786 ntBASIC5.32□□□□□ -1.56
TNFP01375 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFP01375 GAPDHP25-201ENST00000447061 1001 ntBASIC5.32□□□□□ -1.56
TNFP01375 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFP01375 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFP01375 RPS18P6-201ENST00000476880 458 ntBASIC5.32□□□□□ -1.56
TNFP01375 AC008953.1-201ENST00000497334 318 ntBASIC5.32□□□□□ -1.56
TNFP01375 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFP01375 RNU6-941P-201ENST00000516346 108 ntBASIC5.32□□□□□ -1.56
TNFP01375 AC022832.1-201ENST00000530718 645 ntBASIC5.32□□□□□ -1.56
TNFP01375 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.32□□□□□ -1.56
TNFP01375 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFP01375 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFP01375 RPSAP73-201ENST00000614820 330 ntBASIC5.32□□□□□ -1.56
TNFP01375 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
TNFP01375 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFP01375 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TNFP01375 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 SAMMSON-210ENST00000641260 1308 ntBASIC5.31□□□□□ -1.56
TNFP01375 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 AC092681.1-201ENST00000297369 291 ntBASIC5.31□□□□□ -1.56
TNFP01375 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFP01375 RNA5SP507-201ENST00000363603 121 ntBASIC5.31□□□□□ -1.56
TNFP01375 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFP01375 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFP01375 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TNFP01375 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFP01375 AL590399.2-201ENST00000427536 309 ntBASIC5.31□□□□□ -1.56
TNFP01375 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFP01375 PTMAP6-201ENST00000439110 327 ntBASIC5.31□□□□□ -1.56
TNFP01375 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFP01375 AC092754.1-201ENST00000472975 479 ntBASIC5.31□□□□□ -1.56
TNFP01375 RN7SL222P-201ENST00000476452 299 ntBASIC5.31□□□□□ -1.56
TNFP01375 RPL32P9-201ENST00000487963 407 ntBASIC5.31□□□□□ -1.56
TNFP01375 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFP01375 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFP01375 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
TNFP01375 HMGN2P6-201ENST00000551091 273 ntBASIC5.31□□□□□ -1.56
TNFP01375 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFP01375 RPL10P14-201ENST00000565265 298 ntBASIC5.31□□□□□ -1.56
TNFP01375 AC069307.1-201ENST00000602820 447 ntBASIC5.31□□□□□ -1.56
TNFP01375 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFP01375 AC073869.8-201ENST00000641806 335 ntBASIC5.31□□□□□ -1.56
TNFP01375 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFP01375 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms