Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 AC013488.1-201ENST00000526618 1838 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 AP002370.1-201ENST00000528055 1602 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFBP01127 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
PDGFBP01127 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFBP01127 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 AC011369.2-201ENST00000624423 1567 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 CASC19-221ENST00000641309 1382 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 AC020633.1-201ENST00000468439 2247 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFBP01127 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDGFBP01127 RN7SKP104-201ENST00000362605 328 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDGFBP01127 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 RPS6P23-201ENST00000413224 722 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 MTND4LP17-201ENST00000414607 293 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 AC234781.4-201ENST00000419384 244 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 AC245028.1-201ENST00000423259 256 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 FAM96AP1-201ENST00000430879 482 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFBP01127 AC091544.1-201ENST00000484702 348 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 RN7SL591P-201ENST00000496150 292 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFBP01127 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFBP01127 AC013701.1-201ENST00000522657 465 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 IGHV1-14-201ENST00000523391 241 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFBP01127 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 AC078878.1-201ENST00000539832 958 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 AC007494.1-201ENST00000562293 760 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 RBM22P1-201ENST00000578589 1214 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 AL683813.2-201ENST00000605245 502 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 SNORA35B-201ENST00000607417 129 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 OR8G7P-201ENST00000616658 848 ntBASIC5.73□□□□□ -1.49
PDGFBP01127 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFBP01127 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFBP01127 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PDGFBP01127 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC114947.2-201ENST00000565748 2125 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDGFBP01127 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC126755.2-208ENST00000327792 462 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AC138969.1-213ENST00000331436 462 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 FAM32BP-201ENST00000344033 333 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC098592.2-201ENST00000413158 265 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 COX6CP17-201ENST00000421389 185 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AC019205.1-201ENST00000421830 730 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFBP01127 OR6D1P-201ENST00000436165 939 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 snoU13.20-201ENST00000459180 104 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 NDUFA5P9-201ENST00000472609 340 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 RN7SL481P-201ENST00000477764 299 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AP001960.1-201ENST00000506494 658 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFBP01127 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 RNU6-941P-201ENST00000516346 108 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 SUMO2P19-201ENST00000518920 295 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC130364.2-201ENST00000528639 604 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC016839.1-201ENST00000578162 867 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms