Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHOX2O60902 DUTP7-201ENST00000507982 486 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 HMGN1P16-201ENST00000508308 283 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.47□□□□□ -1.53
SHOX2O60902 HMGN1P17-201ENST00000513734 295 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 HNRNPRP2-201ENST00000528421 743 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHOX2O60902 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.47□□□□□ -1.53
SHOX2O60902 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.47□□□□□ -1.53
SHOX2O60902 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.47□□□□□ -1.53
SHOX2O60902 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.47□□□□□ -1.53
SHOX2O60902 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.47□□□□□ -1.53
SHOX2O60902 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.47□□□□□ -1.53
SHOX2O60902 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.47□□□□□ -1.53
SHOX2O60902 AL512652.1-201ENST00000619006 500 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 MIR6823-201ENST00000622118 61 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 AL683826.1-201ENST00000624104 627 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 AC099654.6-201ENST00000636487 512 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 AC005261.2-201ENST00000593427 4258 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHOX2O60902 AC079298.1-201ENST00000625026 1619 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SHOX2O60902 RBPJP2-201ENST00000618187 1444 ntBASIC5.47□□□□□ -1.53
SHOX2O60902 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHOX2O60902 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHOX2O60902 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SHOX2O60902 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHOX2O60902 AL132656.3-201ENST00000606384 1595 ntBASIC5.46□□□□□ -1.53
SHOX2O60902 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHOX2O60902 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHOX2O60902 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHOX2O60902 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHOX2O60902 PSMA6P1-201ENST00000400275 741 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 AC016739.1-201ENST00000405359 345 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 BRWD1P3-201ENST00000428816 390 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHOX2O60902 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.46□□□□□ -1.54
SHOX2O60902 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SHOX2O60902 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHOX2O60902 AC011225.1-201ENST00000457751 369 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 RN7SL393P-201ENST00000463588 296 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 RN7SL814P-201ENST00000487715 300 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.46□□□□□ -1.54
SHOX2O60902 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.46□□□□□ -1.54
SHOX2O60902 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 OR8G3P-201ENST00000533406 921 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 HSPE1P2-201ENST00000554777 306 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHOX2O60902 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.46□□□□□ -1.54
SHOX2O60902 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.46□□□□□ -1.54
SHOX2O60902 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 WBP1LP12-201ENST00000604449 331 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.46□□□□□ -1.54
SHOX2O60902 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 AC090181.3-201ENST00000624777 1514 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHOX2O60902 AL162456.1-201ENST00000634535 2006 ntBASIC5.46□□□□□ -1.54
SHOX2O60902 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHOX2O60902 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHOX2O60902 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SHOX2O60902 AC120036.2-201ENST00000509729 1474 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 LINC01613-201ENST00000561476 2780 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.45□□□□□ -1.54
SHOX2O60902 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHOX2O60902 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHOX2O60902 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.45□□□□□ -1.54
SHOX2O60902 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHOX2O60902 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 AL139805.1-201ENST00000407837 289 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 RN7SKP29-201ENST00000410957 272 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 AC023141.3-201ENST00000436698 278 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 TUBB4BP6-201ENST00000437576 479 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.45□□□□□ -1.54
SHOX2O60902 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.45□□□□□ -1.54
SHOX2O60902 AC093166.4-201ENST00000457867 318 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 CTSLP6-201ENST00000458273 1002 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 RN7SL583P-201ENST00000475692 287 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.45□□□□□ -1.54
SHOX2O60902 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 UGT2A3P7-201ENST00000510485 734 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 SNORA74.1-201ENST00000516320 180 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms