Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX3O60493 RPS7P11-201ENST00000484240 586 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 AC090638.1-201ENST00000498296 909 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX3O60493 RNA5SP75-201ENST00000516841 111 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC009879.1-201ENST00000520029 839 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 MIR4260-201ENST00000583107 67 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.38□□□□□ -1.55
SNX3O60493 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX3O60493 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 AC012467.1-201ENST00000607740 256 ntBASIC5.38□□□□□ -1.55
SNX3O60493 AP000648.2-201ENST00000624182 404 ntBASIC5.38□□□□□ -1.55
SNX3O60493 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.38□□□□□ -1.55
SNX3O60493 AL442128.2-201ENST00000620246 1824 ntBASIC5.38□□□□□ -1.55
SNX3O60493 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.38□□□□□ -1.55
SNX3O60493 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNX3O60493 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.38□□□□□ -1.55
SNX3O60493 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SNX3O60493 AC112198.2-201ENST00000426589 6996 ntBASIC5.38□□□□□ -1.55
SNX3O60493 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNX3O60493 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 AC079298.1-201ENST00000625026 1619 ntBASIC5.37□□□□□ -1.55
SNX3O60493 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.37□□□□□ -1.55
SNX3O60493 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 OR9G4-201ENST00000302957 984 ntBASIC5.37□□□□□ -1.55
SNX3O60493 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNX3O60493 AC005522.1-201ENST00000395416 346 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AL117344.1-201ENST00000407196 616 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AL139039.2-201ENST00000407436 479 ntBASIC5.37□□□□□ -1.55
SNX3O60493 MIR1271-201ENST00000408537 86 ntBASIC5.37□□□□□ -1.55
SNX3O60493 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 RN7SKP97-201ENST00000410966 333 ntBASIC5.37□□□□□ -1.55
SNX3O60493 RAB9AP4-201ENST00000415230 609 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 OR5M12P-201ENST00000423388 929 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AJ239321.1-201ENST00000424255 564 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 TRIM60P13-201ENST00000432350 1283 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC090018.1-201ENST00000434369 367 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AL392003.1-201ENST00000434394 243 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX3O60493 BTBD7P2-201ENST00000441962 620 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.37□□□□□ -1.55
SNX3O60493 RPL31P11-202ENST00000454082 372 ntBASIC5.37□□□□□ -1.55
SNX3O60493 OR52A4P-202ENST00000481634 799 ntBASIC5.37□□□□□ -1.55
SNX3O60493 RPL32P33-201ENST00000487023 394 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC114324.2-202ENST00000503812 134 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC113367.2-201ENST00000505749 160 ntBASIC5.37□□□□□ -1.55
SNX3O60493 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX3O60493 AC021678.3-201ENST00000517893 476 ntBASIC5.37□□□□□ -1.55
SNX3O60493 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.37□□□□□ -1.55
SNX3O60493 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.37□□□□□ -1.55
SNX3O60493 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 AC023389.2-201ENST00000580031 955 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.37□□□□□ -1.55
SNX3O60493 MIR6809-201ENST00000612189 116 ntBASIC5.37□□□□□ -1.55
SNX3O60493 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 BX005214.3-202ENST00000619809 325 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC022919.1-201ENST00000624979 626 ntBASIC5.37□□□□□ -1.55
SNX3O60493 AC099654.6-201ENST00000636487 512 ntBASIC5.37□□□□□ -1.55
SNX3O60493 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNX3O60493 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.37□□□□□ -1.55
SNX3O60493 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNX3O60493 LINC01613-201ENST00000561476 2780 ntBASIC5.37□□□□□ -1.55
SNX3O60493 SMG1P4-204ENST00000523028 4131 ntBASIC5.37□□□□□ -1.55
SNX3O60493 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SNX3O60493 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX3O60493 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX3O60493 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
SNX3O60493 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX3O60493 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX3O60493 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SNX3O60493 RNU1-19P-201ENST00000363306 165 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms