Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC239798.3-201ENST00000454459 408 ntBASIC5.3□□□□□ -1.56
SSX4O60224 VPS25P1-201ENST00000455691 508 ntBASIC5.3□□□□□ -1.56
SSX4O60224 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SSX4O60224 AC098583.1-201ENST00000480875 255 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX4O60224 RNA5SP340-201ENST00000517132 107 ntBASIC5.3□□□□□ -1.56
SSX4O60224 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 AC130365.2-201ENST00000525882 1201 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX4O60224 AC126615.2-201ENST00000553003 515 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX4O60224 MTND2P13-201ENST00000577438 1039 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AP001496.3-201ENST00000580230 913 ntBASIC5.3□□□□□ -1.56
SSX4O60224 ADAD1P2-201ENST00000588476 646 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 AC100767.2-201ENST00000604840 693 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC007423.1-201ENST00000605009 627 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 AL355802.4-201ENST00000607635 548 ntBASIC5.3□□□□□ -1.56
SSX4O60224 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 AC015689.2-201ENST00000528172 1738 ntBASIC5.3□□□□□ -1.56
SSX4O60224 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 RN7SKP185-201ENST00000362813 326 ntBASIC5.29□□□□□ -1.56
SSX4O60224 Y_RNA.110-201ENST00000363220 99 ntBASIC5.29□□□□□ -1.56
SSX4O60224 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 RN7SKP121-201ENST00000410842 305 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.29□□□□□ -1.56
SSX4O60224 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AC104843.2-201ENST00000427666 297 ntBASIC5.29□□□□□ -1.56
SSX4O60224 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 RPL17P35-201ENST00000432217 549 ntBASIC5.29□□□□□ -1.56
SSX4O60224 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 RPL31P15-201ENST00000449770 338 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AL162739.1-201ENST00000450606 307 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 RPL12P39-201ENST00000455456 496 ntBASIC5.29□□□□□ -1.56
SSX4O60224 CYCSP53-201ENST00000455540 265 ntBASIC5.29□□□□□ -1.56
SSX4O60224 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AC010343.2-201ENST00000510162 224 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AC060775.1-201ENST00000518241 520 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.29□□□□□ -1.56
SSX4O60224 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 RNU4ATAC-201ENST00000580972 127 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AC092574.1-201ENST00000609771 420 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AP000894.4-201ENST00000610185 483 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AC022106.1-201ENST00000612834 766 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX4O60224 OR8G7P-201ENST00000616658 848 ntBASIC5.29□□□□□ -1.56
SSX4O60224 MIR7159-201ENST00000620587 66 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AC106730.3-201ENST00000624568 641 ntBASIC5.29□□□□□ -1.56
SSX4O60224 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 AC129915.3-201ENST00000634128 948 ntBASIC5.29□□□□□ -1.56
SSX4O60224 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSX4O60224 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms