Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1AO00322 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1AO00322 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1AO00322 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1AO00322 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1AO00322 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1AO00322 RN7SKP6-201ENST00000364795 319 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1AO00322 MIR1282-201ENST00000408865 101 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1AO00322 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.15□□□□□ -1.59
UPK1AO00322 FMO7P-201ENST00000436045 768 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AC002504.1-201ENST00000438281 691 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AC064862.4-201ENST00000442180 334 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.15□□□□□ -1.59
UPK1AO00322 RPL36AP39-201ENST00000445859 318 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 RN7SL72P-201ENST00000460697 269 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.15□□□□□ -1.59
UPK1AO00322 EIF3KP3-201ENST00000514461 639 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 SCARNA20.4-201ENST00000516969 131 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.15□□□□□ -1.59
UPK1AO00322 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.15□□□□□ -1.59
UPK1AO00322 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.15□□□□□ -1.59
UPK1AO00322 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1AO00322 AC135626.1-201ENST00000556983 435 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.15□□□□□ -1.59
UPK1AO00322 AC010547.6-201ENST00000571789 193 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.15□□□□□ -1.59
UPK1AO00322 MIR4433B-201ENST00000581329 102 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1AO00322 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
UPK1AO00322 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
UPK1AO00322 CU639417.4-201ENST00000623928 207 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
UPK1AO00322 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1AO00322 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1AO00322 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1AO00322 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1AO00322 AC090220.1-201ENST00000593078 1699 ntBASIC5.15□□□□□ -1.59
UPK1AO00322 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1AO00322 AL034549.2-201ENST00000618285 3373 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1AO00322 OR1L6-202ENST00000373684 1044 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 SNORA48.4-201ENST00000391089 134 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
UPK1AO00322 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 AC211486.3-201ENST00000412694 621 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 RPL12P9-201ENST00000412942 488 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 OR6E1P-201ENST00000414424 923 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 AC017019.1-201ENST00000426129 261 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1AO00322 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 AL157385.1-201ENST00000446973 268 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1AO00322 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1AO00322 OR11H3P-201ENST00000554547 982 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1AO00322 AC090888.3-201ENST00000558917 509 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 RBM22P12-201ENST00000567098 1255 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 PRPF19P1-201ENST00000584766 898 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 AC012616.1-201ENST00000600294 197 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 AC135068.5-201ENST00000624197 983 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 AC007683.2-201ENST00000624681 714 ntBASIC5.14□□□□□ -1.59
UPK1AO00322 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
UPK1AO00322 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
UPK1AO00322 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1AO00322 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
UPK1AO00322 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1AO00322 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
UPK1AO00322 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms