Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 MSL3P1-202ENST00000440028 1468 ntBASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
YJEFN3A6XGL0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AL137058.3-201ENST00000624531 3099 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 RNA5SP339-201ENST00000390987 122 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AL050305.1-201ENST00000399993 1230 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AL133325.1-201ENST00000421090 382 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 DSTNP5-201ENST00000427921 523 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 RPL7L1P9-201ENST00000431298 745 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AP000894.4-201ENST00000610185 483 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 CASC19-264ENST00000641912 1184 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC015799.1-201ENST00000622996 3122 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AC006600.2-201ENST00000624834 2506 ntBASIC5.67□□□□□ -1.5
YJEFN3A6XGL0 AL355834.1-201ENST00000556602 3965 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 Z83820.1-201ENST00000456978 1499 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC092681.1-201ENST00000297369 291 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 RNA5SP183-201ENST00000362452 119 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 DBIP1-201ENST00000401435 260 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 PPIAP9-201ENST00000403866 498 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 RPL12P17-201ENST00000432393 498 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC138761.5-201ENST00000433967 325 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 PSAT1P4-201ENST00000466500 526 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC092754.1-201ENST00000472975 479 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 RPS4XP1-201ENST00000482189 787 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 PGAM1P13-201ENST00000507497 754 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC079064.1-201ENST00000528365 362 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC107993.1-201ENST00000591343 684 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 SAMMSON-209ENST00000641222 1100 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 AC100757.1-201ENST00000616872 1835 ntBASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YJEFN3A6XGL0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 1128.6 ms