Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 FTLP8-201ENST00000446770 267 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 AC239798.3-201ENST00000454459 408 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 RPS12P31-201ENST00000491419 398 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 BTG4P1-201ENST00000510421 183 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 H3F3BP2-201ENST00000583907 357 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 AL139407.1-201ENST00000613826 1175 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 SAMMSON-213ENST00000641336 1521 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
RBFOX3A6NFN3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.34□□□□□ -1.72
RBFOX3A6NFN3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RBFOX3A6NFN3 AC126323.6-202ENST00000568092 3511 ntBASIC4.34□□□□□ -1.72
RBFOX3A6NFN3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RBFOX3A6NFN3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RBFOX3A6NFN3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 UBTFL2-201ENST00000411859 1191 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AL360013.1-201ENST00000419031 858 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 PSMD10P2-201ENST00000432890 672 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC090018.1-201ENST00000434369 367 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC010086.1-201ENST00000437359 1052 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AL596266.1-201ENST00000448132 400 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC068491.1-201ENST00000449539 1241 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC019084.1-201ENST00000457337 432 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 OR11I1P-201ENST00000486033 954 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC095052.1-201ENST00000509955 863 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 SNX18P25-201ENST00000510539 758 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC068768.2-201ENST00000602352 343 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AL021918.2-201ENST00000613415 194 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AP003072.5-201ENST00000623872 773 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 LINC01355-201ENST00000566551 5444 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC083843.3-201ENST00000623679 2186 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 AC012254.3-201ENST00000591183 2117 ntBASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RBFOX3A6NFN3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 MTCO1P28-201ENST00000574177 1528 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 RPL11P4-201ENST00000332269 436 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 SNORA64.3-201ENST00000365647 134 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC005522.1-201ENST00000395416 346 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AL589994.1-201ENST00000404962 340 ntBASIC4.32□□□□□ -1.72
RBFOX3A6NFN3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms