Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 TPM4P1-201ENST00000436100 807 ntBASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 AC087388.1-201ENST00000571370 1112 ntBASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 MYC-208ENST00000641036 567 ntBASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SHANK2Q9UPX8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 SLC25A1P2-201ENST00000430693 912 ntBASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 AC022616.7-201ENST00000525383 220 ntBASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC29.3■■■□□ 2.28
SHANK2Q9UPX8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 HIST1H2APS4-201ENST00000362070 348 ntBASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 AC104076.2-201ENST00000448912 469 ntBASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 AC010653.2-201ENST00000623505 997 ntBASIC29.29■■■□□ 2.28
SHANK2Q9UPX8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 KRT8P41-201ENST00000533985 1514 ntBASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 WWOX-216ENST00000569818 525 ntBASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SHANK2Q9UPX8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 AC073314.1-201ENST00000568729 2216 ntBASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 AC092338.2-201ENST00000568827 1415 ntBASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SHANK2Q9UPX8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.26■■■□□ 2.28
SHANK2Q9UPX8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 AL160286.2-201ENST00000567150 934 ntBASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 AC009237.14-201ENST00000609975 1594 ntBASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
SHANK2Q9UPX8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 AC007663.1-201ENST00000438948 1240 ntBASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 AL023803.3-201ENST00000615559 522 ntBASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 AL138966.2-201ENST00000621997 464 ntBASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SHANK2Q9UPX8 AL162377.1-201ENST00000618844 1793 ntBASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms