Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 AP001412.1-201ENST00000608405 714 ntBASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 AL356652.1-201ENST00000615962 565 ntBASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NCKIPSDQ9NZQ3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCKIPSDQ9NZQ3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCKIPSDQ9NZQ3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCKIPSDQ9NZQ3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 AC012618.2-201ENST00000428058 849 ntBASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 AC233263.1-201ENST00000578059 224 ntBASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 AL135905.2-201ENST00000584934 1404 ntBASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKIPSDQ9NZQ3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 AC133681.1-201ENST00000465482 601 ntBASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 AC120498.8-201ENST00000614275 531 ntBASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NCKIPSDQ9NZQ3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 MTDHP1-201ENST00000605323 784 ntBASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 AC125437.2-201ENST00000625180 2167 ntBASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCKIPSDQ9NZQ3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCKIPSDQ9NZQ3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms