Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS45Q9NRW7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
VPS45Q9NRW7 KRT16P6-202ENST00000425692 1426 ntBASIC20.27■□□□□ 0.83
VPS45Q9NRW7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.27■□□□□ 0.83
VPS45Q9NRW7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
VPS45Q9NRW7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
VPS45Q9NRW7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 AC007952.6-201ENST00000573168 2673 ntBASIC20.26■□□□□ 0.83
VPS45Q9NRW7 AC003957.1-201ENST00000625108 2673 ntBASIC20.26■□□□□ 0.83
VPS45Q9NRW7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VPS45Q9NRW7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 AL353708.3-201ENST00000610272 989 ntBASIC20.25■□□□□ 0.83
VPS45Q9NRW7 AC026471.5-201ENST00000615068 467 ntBASIC20.25■□□□□ 0.83
VPS45Q9NRW7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.25■□□□□ 0.83
VPS45Q9NRW7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 MMP23A-201ENST00000234610 1017 ntBASIC20.24■□□□□ 0.83
VPS45Q9NRW7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 AC112907.3-201ENST00000577781 2400 ntBASIC20.24■□□□□ 0.83
VPS45Q9NRW7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.24■□□□□ 0.83
VPS45Q9NRW7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 AL390719.1-204ENST00000412397 1219 ntBASIC20.23■□□□□ 0.83
VPS45Q9NRW7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 AL049597.2-201ENST00000565575 961 ntBASIC20.23■□□□□ 0.83
VPS45Q9NRW7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VPS45Q9NRW7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms