Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cttnbp2nlQ99LJ0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.08■□□□□ 0.33
Cttnbp2nlQ99LJ0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cttnbp2nlQ99LJ0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Cttnbp2nlQ99LJ0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cttnbp2nlQ99LJ0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cttnbp2nlQ99LJ0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cttnbp2nlQ99LJ0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm29257-201ENSMUST00000186115 639 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Rab3c-203ENSMUST00000224180 967 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.05■□□□□ 0.32
Cttnbp2nlQ99LJ0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm10849-201ENSMUST00000100397 618 ntBASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cttnbp2nlQ99LJ0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms