Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR4745-201ENST00000577608 62 ntBASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 BMF-207ENST00000559701 630 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AL645939.2-201ENST00000427340 991 ntBASIC6.04□□□□□ -1.44
HMCN1Q96RW7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 AC093909.1-201ENST00000504731 1122 ntBASIC6.04□□□□□ -1.44
HMCN1Q96RW7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC6.04□□□□□ -1.44
HMCN1Q96RW7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 FAM215A-202ENST00000632077 792 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC092474.2-201ENST00000424288 719 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC104109.2-201ENST00000602919 1418 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 STARP1-201ENST00000397973 869 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 ATP6V0CP3-201ENST00000417255 467 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC005225.4-201ENST00000557330 545 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 HBZP1-201ENST00000354915 429 ntBASIC6.03□□□□□ -1.44
HMCN1Q96RW7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMCN1Q96RW7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms