Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 AL138966.2-201ENST00000621997 464 ntBASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 AC010653.2-201ENST00000623505 997 ntBASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPAS4Q8IUM7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 BX119927.1-201ENST00000636596 1552 ntBASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NPAS4Q8IUM7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NPAS4Q8IUM7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
NPAS4Q8IUM7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 FAM8A6P-201ENST00000407496 1135 ntBASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 AC007663.1-201ENST00000438948 1240 ntBASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 AC139887.4-201ENST00000607877 719 ntBASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NPAS4Q8IUM7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 AC092338.2-201ENST00000568827 1415 ntBASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 RNF152P1-201ENST00000397754 604 ntBASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS4Q8IUM7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms