Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 CLDN5-201ENST00000403084 2357 ntBASIC18.79■□□□□ 0.6
GFERP55789 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
GFERP55789 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.79■□□□□ 0.6
GFERP55789 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.79■□□□□ 0.6
GFERP55789 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GFERP55789 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.79■□□□□ 0.6
GFERP55789 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.79■□□□□ 0.6
GFERP55789 AC026271.3-201ENST00000571884 352 ntBASIC18.79■□□□□ 0.6
GFERP55789 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.79■□□□□ 0.6
GFERP55789 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFERP55789 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GFERP55789 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.79■□□□□ 0.6
GFERP55789 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GFERP55789 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
GFERP55789 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GFERP55789 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
GFERP55789 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.78■□□□□ 0.6
GFERP55789 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.78■□□□□ 0.6
GFERP55789 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
GFERP55789 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.78■□□□□ 0.6
GFERP55789 B3GAT3P1-201ENST00000471720 806 ntBASIC18.78■□□□□ 0.6
GFERP55789 AC011506.1-201ENST00000474329 610 ntBASIC18.78■□□□□ 0.6
GFERP55789 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
GFERP55789 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.78■□□□□ 0.6
GFERP55789 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.78■□□□□ 0.6
GFERP55789 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.78■□□□□ 0.6
GFERP55789 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.78■□□□□ 0.6
GFERP55789 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.78■□□□□ 0.6
GFERP55789 AL157384.1-201ENST00000445995 2473 ntBASIC18.78■□□□□ 0.6
GFERP55789 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFERP55789 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GFERP55789 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GFERP55789 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.77■□□□□ 0.6
GFERP55789 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.77■□□□□ 0.6
GFERP55789 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.77■□□□□ 0.6
GFERP55789 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.77■□□□□ 0.6
GFERP55789 FITM1-202ENST00000559294 800 ntBASIC18.77■□□□□ 0.6
GFERP55789 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
GFERP55789 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.77■□□□□ 0.6
GFERP55789 AC131212.4-201ENST00000623606 975 ntBASIC18.77■□□□□ 0.6
GFERP55789 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.77■□□□□ 0.6
GFERP55789 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFERP55789 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.77■□□□□ 0.6
GFERP55789 CYP2D8P-201ENST00000433633 1490 ntBASIC18.77■□□□□ 0.59
GFERP55789 FSCN1P1-201ENST00000568912 1481 ntBASIC18.77■□□□□ 0.59
GFERP55789 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GFERP55789 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
GFERP55789 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFERP55789 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GFERP55789 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFERP55789 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GFERP55789 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GFERP55789 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFERP55789 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GFERP55789 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFERP55789 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GFERP55789 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms