Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.43■□□□□ 0.38
CNOT4O95628 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CNOT4O95628 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 KRT16P5-201ENST00000455284 522 ntBASIC17.43■□□□□ 0.38
CNOT4O95628 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.43■□□□□ 0.38
CNOT4O95628 Z99916.2-201ENST00000604037 246 ntBASIC17.43■□□□□ 0.38
CNOT4O95628 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CNOT4O95628 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 AL162377.1-201ENST00000618844 1793 ntBASIC17.43■□□□□ 0.38
CNOT4O95628 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CNOT4O95628 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT4O95628 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNOT4O95628 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT4O95628 TFP1-202ENST00000475455 1573 ntBASIC17.42■□□□□ 0.38
CNOT4O95628 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CNOT4O95628 MIR1224-201ENST00000408193 85 ntBASIC17.42■□□□□ 0.38
CNOT4O95628 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.42■□□□□ 0.38
CNOT4O95628 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT4O95628 SNORA78-201ENST00000459373 127 ntBASIC17.42■□□□□ 0.38
CNOT4O95628 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT4O95628 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT4O95628 REXO1L12P-201ENST00000622156 912 ntBASIC17.42■□□□□ 0.38
CNOT4O95628 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT4O95628 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.42■□□□□ 0.38
CNOT4O95628 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT4O95628 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CNOT4O95628 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT4O95628 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CNOT4O95628 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT4O95628 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT4O95628 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT4O95628 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 AP001271.2-201ENST00000624018 1556 ntBASIC17.41■□□□□ 0.38
CNOT4O95628 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT4O95628 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT4O95628 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 AC211429.1-201ENST00000415277 523 ntBASIC17.41■□□□□ 0.38
CNOT4O95628 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.41■□□□□ 0.38
CNOT4O95628 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CNOT4O95628 RARRES2P10-201ENST00000564312 460 ntBASIC17.41■□□□□ 0.38
CNOT4O95628 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.41■□□□□ 0.38
CNOT4O95628 AP001412.1-201ENST00000608405 714 ntBASIC17.41■□□□□ 0.38
CNOT4O95628 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 AC018553.1-201ENST00000616682 1458 ntBASIC17.41■□□□□ 0.38
CNOT4O95628 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNOT4O95628 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT4O95628 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CNOT4O95628 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT4O95628 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT4O95628 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT4O95628 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT4O95628 AL353807.1-201ENST00000427475 662 ntBASIC17.4■□□□□ 0.38
CNOT4O95628 AC012618.2-201ENST00000428058 849 ntBASIC17.4■□□□□ 0.38
CNOT4O95628 FAM210CP-201ENST00000445714 574 ntBASIC17.4■□□□□ 0.38
CNOT4O95628 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT4O95628 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT4O95628 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.4■□□□□ 0.38
CNOT4O95628 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.4■□□□□ 0.38
CNOT4O95628 AP006587.1-201ENST00000534129 1502 ntBASIC17.4■□□□□ 0.38
CNOT4O95628 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT4O95628 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 AL157384.1-201ENST00000445995 2473 ntBASIC17.4■□□□□ 0.38
CNOT4O95628 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CNOT4O95628 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT4O95628 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT4O95628 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT4O95628 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT4O95628 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms