Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD6O43541 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMAD6O43541 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMAD6O43541 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMAD6O43541 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD6O43541 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.88■□□□□ 0.77
SMAD6O43541 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.88■□□□□ 0.77
SMAD6O43541 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD6O43541 AC073195.1-201ENST00000607241 877 ntBASIC19.88■□□□□ 0.77
SMAD6O43541 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SMAD6O43541 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.88■□□□□ 0.77
SMAD6O43541 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.87■□□□□ 0.77
SMAD6O43541 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
SMAD6O43541 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 NIFKP9-201ENST00000419265 221 ntBASIC19.87■□□□□ 0.77
SMAD6O43541 TSPY15P-201ENST00000457163 923 ntBASIC19.87■□□□□ 0.77
SMAD6O43541 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SMAD6O43541 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMAD6O43541 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.86■□□□□ 0.77
SMAD6O43541 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SMAD6O43541 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.86■□□□□ 0.77
SMAD6O43541 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SMAD6O43541 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.86■□□□□ 0.77
SMAD6O43541 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.86■□□□□ 0.77
SMAD6O43541 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SMAD6O43541 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.86■□□□□ 0.77
SMAD6O43541 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD6O43541 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SMAD6O43541 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.85■□□□□ 0.77
SMAD6O43541 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.85■□□□□ 0.77
SMAD6O43541 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMAD6O43541 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.85■□□□□ 0.77
SMAD6O43541 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 CR392000.1-201ENST00000624770 1228 ntBASIC19.85■□□□□ 0.77
SMAD6O43541 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMAD6O43541 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.85■□□□□ 0.77
SMAD6O43541 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD6O43541 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.84■□□□□ 0.77
SMAD6O43541 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SMAD6O43541 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.84■□□□□ 0.77
SMAD6O43541 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SMAD6O43541 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 KSR1P1-201ENST00000446298 240 ntBASIC19.84■□□□□ 0.77
SMAD6O43541 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.84■□□□□ 0.77
SMAD6O43541 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.84■□□□□ 0.77
SMAD6O43541 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms