Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 RPL11P3-201ENST00000395256 523 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 TNPO1P1-201ENST00000423641 1138 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 RPL12P16-201ENST00000431098 498 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 CYCSP51-201ENST00000443545 318 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AP000547.1-201ENST00000454360 617 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC090058.1-201ENST00000498788 435 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 DUTP7-201ENST00000507982 486 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC139697.1-201ENST00000548429 745 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 TMF1P1-201ENST00000576058 373 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC016839.1-201ENST00000578162 867 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC245128.3-201ENST00000594721 748 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC104695.2-201ENST00000605056 775 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC138473.1-201ENST00000605717 526 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 NANOGP3-201ENST00000605855 286 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AL023583.1-201ENST00000607518 1143 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AL391597.1-201ENST00000618707 694 ntBASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX9Q9Y5X1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AL133173.1-201ENST00000423458 397 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC006335.2-201ENST00000437993 330 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 NDUFA5P8-201ENST00000449019 346 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 SUMO2P4-201ENST00000504193 276 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 IGLV3-24-201ENST00000517477 197 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC025857.1-201ENST00000525252 377 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 MRPS21P7-201ENST00000566937 238 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 RBM22P12-201ENST00000567098 1255 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC009303.3-201ENST00000591103 736 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 BX322635.1-201ENST00000605804 496 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC092953.2-201ENST00000608000 699 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC073575.2-201ENST00000614212 627 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 AC007683.2-201ENST00000624681 714 ntBASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX9Q9Y5X1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 DDX18P6-201ENST00000450119 1997 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC013268.2-201ENST00000420753 337 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms