Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 DYNLL1P1-201ENST00000595442 269 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 NRBF2P5-201ENST00000603087 788 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC091488.1-201ENST00000604239 660 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC112191.3-201ENST00000604371 277 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL050343.2-201ENST00000607338 280 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC093838.1-201ENST00000613014 469 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC099654.15-201ENST00000639802 509 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL445250.1-203ENST00000641829 1535 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 SNORD56.2-201ENST00000363242 71 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL353151.1-201ENST00000402406 604 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 SNX18P13-201ENST00000412442 529 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 FTH1P5-201ENST00000425761 545 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL513175.1-201ENST00000431492 780 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL358934.1-201ENST00000432346 324 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 RPL21P110-201ENST00000433345 446 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 PGBD4P3-201ENST00000440731 581 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 NIPA2P5-201ENST00000452282 464 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC022364.2-201ENST00000457963 554 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC091564.1-201ENST00000464563 479 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 RN7SL549P-201ENST00000478997 282 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 FTH1P23-201ENST00000492727 550 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 GAPDHP61-201ENST00000507324 1005 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC112225.1-201ENST00000508230 297 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 FGF7P4-201ENST00000509595 295 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC113352.1-201ENST00000513196 666 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC108064.1-201ENST00000513791 460 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC109635.6-201ENST00000525487 1113 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC022878.1-201ENST00000530684 149 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AP003072.1-201ENST00000531740 145 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL512360.1-201ENST00000555346 234 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL359212.1-201ENST00000556608 614 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC138915.2-201ENST00000569776 97 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 MIR5192-201ENST00000579892 92 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC010487.1-201ENST00000594408 1172 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC115286.1-201ENST00000604298 434 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AL035413.2-201ENST00000604801 525 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC068726.1-201ENST00000610993 341 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC012488.1-201ENST00000611221 640 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 BX005040.2-201ENST00000620504 370 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC015871.5-202ENST00000623252 701 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms