Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC092681.1-201ENST00000297369 291 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 RNA5SP394-201ENST00000364216 119 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 SNORA11.5-201ENST00000408163 128 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC127526.2-201ENST00000426436 775 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 ATP5LP5-201ENST00000483050 299 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AL049874.2-201ENST00000492636 288 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 RNU6-615P-201ENST00000516065 106 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 CYCSP22-201ENST00000517555 339 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 MRPS16P1-201ENST00000523462 412 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC137627.1-201ENST00000545761 289 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 DHFRP1-201ENST00000579682 559 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC127024.5-201ENST00000580085 462 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 MIR4472-2-201ENST00000582069 67 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AL359742.1-201ENST00000622497 540 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 MIR193BHG-214ENST00000641765 509 ntBASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 SNORA64.1-201ENST00000362600 132 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 RNA5SP30-201ENST00000365552 115 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 U3.28-201ENST00000391249 210 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 HMGB1P20-201ENST00000402555 677 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 SDHDP6-201ENST00000414693 480 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC093155.2-201ENST00000420734 937 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 RPS3P2-201ENST00000421346 701 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC113412.1-201ENST00000425840 504 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 KCTD9P1-201ENST00000430462 1167 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 TMEM183AP1-205ENST00000432739 290 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 RPL23AP19-201ENST00000436229 369 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 RPSAP41-201ENST00000439695 860 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC005297.1-201ENST00000444765 862 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 NXT1P1-201ENST00000458481 316 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 RPS23P6-201ENST00000466136 431 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC007998.1-201ENST00000474156 672 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 RPS26P24-201ENST00000497656 331 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 PSMA2P2-201ENST00000504319 686 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC021193.1-201ENST00000511607 420 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 SNORD46.2-201ENST00000516021 102 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 IGKV2-4-201ENST00000523070 340 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC127381.1-201ENST00000555979 939 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC040958.1-201ENST00000561102 201 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC015802.2-201ENST00000589690 189 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 MIR6861-201ENST00000618657 64 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AL390318.1-201ENST00000624564 687 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms