Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RPL7P4-203ENST00000430239 730 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 PYHIN5P-201ENST00000431627 723 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 PRPS1P1-201ENST00000445305 876 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RPL7P5-201ENST00000471472 736 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC011005.2-201ENST00000487324 359 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RPS4XP18-201ENST00000495480 763 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 PGAM4P2-201ENST00000512491 721 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RNU6-1220P-201ENST00000517126 108 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 SNORA81.3-201ENST00000517283 198 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC008126.1-201ENST00000549019 480 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 RN7SL689P-201ENST00000577215 297 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AP001120.4-201ENST00000590231 108 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC125232.2-201ENST00000592457 143 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL513327.3-201ENST00000602618 469 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL121917.2-201ENST00000605044 390 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL451054.3-201ENST00000611115 776 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL109933.4-201ENST00000612111 157 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AC243773.3-201ENST00000613270 256 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL669831.3-213ENST00000636676 183 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LHX6Q9UPM6 ACTR3BP5-201ENST00000448440 1479 ntBASIC8.13□□□□□ -1.11
LHX6Q9UPM6 AOX2P-204ENST00000487742 3284 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 EIF4BP5-201ENST00000567338 1795 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AC114689.1-201ENST00000578727 2484 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AL133320.1-201ENST00000621423 2352 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AC003985.2-201ENST00000562268 1669 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.270-201ENST00000364693 104 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 RNU6-1081P-201ENST00000384537 107 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 RNU6-601P-201ENST00000384540 107 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 MIR27A-201ENST00000385073 78 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AL121972.1-201ENST00000402023 252 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 SKA2P1-201ENST00000425592 390 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 HMGB3P11-201ENST00000440127 604 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 AC098831.1-201ENST00000440661 216 ntBASIC8.12□□□□□ -1.11
LHX6Q9UPM6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC8.12□□□□□ -1.11
LHX6Q9UPM6 DYNLT3P2-201ENST00000442517 295 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms