Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 MTHFD2P5-201ENST00000320415 844 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 NFYAP1-201ENST00000431953 972 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC012075.1-201ENST00000436549 580 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC015983.1-201ENST00000441577 373 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 SPRYD7P1-201ENST00000443861 570 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 MEMO1P4-201ENST00000453590 386 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 RN7SL184P-201ENST00000488308 297 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC009120.1-201ENST00000493458 473 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 SUMO2P4-201ENST00000504193 276 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 ST13P12-201ENST00000508958 1094 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 BX510359.5-201ENST00000515651 304 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 MRPS16P1-201ENST00000523462 412 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 DPPA2P4-201ENST00000563717 878 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 SUMO2P15-201ENST00000604285 278 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC007683.2-201ENST00000624681 714 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC007842.1-201ENST00000597336 2039 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 AC233968.1-201ENST00000611212 1300 ntBASIC5.23□□□□□ -1.57
NPIPA1Q9UND3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 CASC19-248ENST00000641674 1356 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 OR9K1P-201ENST00000326513 941 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC021876.1-201ENST00000425959 359 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 CYCSP51-201ENST00000443545 318 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL163193.1-201ENST00000444895 788 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL450996.1-201ENST00000445574 1202 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 RBM22P12-201ENST00000567098 1255 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC060780.2-201ENST00000589047 198 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 OR7E18P-201ENST00000592589 702 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AC119501.1-201ENST00000603646 475 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AP003400.2-201ENST00000624036 666 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 AL158152.1-201ENST00000602652 1435 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 DDX18P6-201ENST00000450119 1997 ntBASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.22□□□□□ -1.57
NPIPA1Q9UND3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms