Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 RN7SL197P-201ENST00000466981 299 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 RN7SL799P-201ENST00000475891 298 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 RNA5SP34-201ENST00000516887 130 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 H3F3BP2-201ENST00000583907 357 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AC016252.1-201ENST00000609721 474 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 MIR6837-201ENST00000620884 64 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 PABPC1P6-201ENST00000445594 1829 ntBASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMG20BQ9P0W2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 MIR133B-201ENST00000362210 119 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 PRUNEP1-201ENST00000425846 705 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AL136455.1-201ENST00000441083 1240 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AL163193.1-201ENST00000444895 788 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC023271.1-201ENST00000445936 1090 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC105399.1-202ENST00000447303 205 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AL606490.1-201ENST00000452266 765 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 RN7SL188P-201ENST00000469842 285 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 RPEP1-201ENST00000504507 658 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC008638.1-201ENST00000506035 866 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 OR5D2P-201ENST00000524390 911 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 GTF2IP11-201ENST00000526931 420 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 OR5AM1P-201ENST00000532136 1032 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AP005403.1-201ENST00000579720 229 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AL139124.1-201ENST00000609123 421 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC010809.3-201ENST00000621310 641 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 MIR6719-201ENST00000622428 87 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC004808.2-201ENST00000627965 773 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 AC144833.1-201ENST00000567953 4089 ntBASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMG20BQ9P0W2 MAPK10-261ENST00000641050 3109 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AC104964.3-201ENST00000606115 2860 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AL137058.3-201ENST00000624531 3099 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 SRSF1P1-201ENST00000424058 520 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AZGP1P2-201ENST00000454506 345 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 RN7SL727P-201ENST00000482164 296 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AC007448.1-201ENST00000582714 234 ntBASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HMG20BQ9P0W2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMG20BQ9P0W2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMG20BQ9P0W2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMG20BQ9P0W2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms