Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 Z95114.1-201ENST00000624264 14574 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AP000641.1-201ENST00000531988 1639 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 RN7SKP160-201ENST00000363804 340 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC009804.1-201ENST00000400949 179 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 AL390774.1-201ENST00000411924 246 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 NPM1P18-201ENST00000434232 732 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 CYCSP6-201ENST00000434498 302 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 PPIAP20-201ENST00000449839 135 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 IGBP1P4-201ENST00000503202 879 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 HMGN1P9-201ENST00000515212 298 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC126177.5-201ENST00000549599 178 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AP001153.1-201ENST00000641024 338 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AL078621.3-201ENST00000623707 2042 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 Z83820.1-201ENST00000456978 1499 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CISHQ9NSE2 AC137056.2-201ENST00000624055 1958 ntBASIC5.75□□□□□ -1.49
CISHQ9NSE2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CISHQ9NSE2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 RNA5SP339-201ENST00000390987 122 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AL133325.1-201ENST00000421090 382 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 SPRYD7P1-201ENST00000443861 570 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AL451063.1-201ENST00000450164 1133 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 RPS26P41-201ENST00000450370 284 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 SIAH1P1-201ENST00000479411 923 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC058823.1-201ENST00000485315 474 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 EIF3LP3-201ENST00000495197 822 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 RPEP1-201ENST00000504507 658 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 SNORA81.2-201ENST00000516868 170 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 HMGB1P40-201ENST00000525121 540 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AL162574.1-201ENST00000615702 950 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC109583.2-201ENST00000617367 129 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AP003400.3-201ENST00000624904 346 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.74□□□□□ -1.49
CISHQ9NSE2 AC099654.6-201ENST00000636487 512 ntBASIC5.74□□□□□ -1.49
CISHQ9NSE2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CISHQ9NSE2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 RN7SKP59-201ENST00000410520 314 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms