Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC124856.1-201ENST00000600819 896 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL109653.1-201ENST00000603091 248 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 BUB1P1-201ENST00000603541 607 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 Z99497.2-201ENST00000603634 310 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL359704.2-201ENST00000604335 521 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL589743.6-201ENST00000611025 117 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC048341.3-201ENST00000619323 491 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 OR8B1P-202ENST00000641132 1178 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 OR8A1-204ENST00000642111 1145 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 MAPK10-344ENST00000641718 3746 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 AC003973.3-201ENST00000624863 2822 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 IMMTP1-201ENST00000435590 2219 ntBASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM39Q9HCM9 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 OR2M1P-201ENST00000318104 951 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RNU6-413P-201ENST00000384115 107 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RNU6-185P-201ENST00000384421 107 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RPL5P20-201ENST00000403848 896 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC009518.2-201ENST00000418056 731 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC090960.1-201ENST00000421072 306 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 C1DP1-201ENST00000426049 402 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 PMS2P9-201ENST00000441237 515 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC245291.3-201ENST00000443400 292 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RPS27AP2-201ENST00000457576 465 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 USP9YP25-201ENST00000457708 443 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RPS7P10-201ENST00000464254 603 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RPL5P14-201ENST00000494197 878 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC111193.1-201ENST00000504097 155 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC113347.3-201ENST00000509113 148 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 PRELID3BP4-201ENST00000515476 571 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 MTCO3P15-201ENST00000526563 574 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 RPL3P13-201ENST00000550415 216 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 DUXAP6-201ENST00000553858 601 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AP001269.3-201ENST00000588718 329 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AL353778.1-201ENST00000603149 408 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 MTND3P19-201ENST00000603825 345 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AL157899.1-201ENST00000604110 936 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AL352984.2-201ENST00000611153 546 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC007342.8-201ENST00000623278 678 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 SNX18P10-201ENST00000625014 519 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC005702.3-201ENST00000585345 1447 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 AC009120.2-204ENST00000621548 2032 ntBASIC6.47□□□□□ -1.37
TRIM39Q9HCM9 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM39Q9HCM9 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM39Q9HCM9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM39Q9HCM9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms