Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 Z92846.1-201ENST00000456203 268 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC006499.6-201ENST00000511169 607 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC026726.1-201ENST00000512859 601 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC119751.5-201ENST00000514077 770 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 IGKV1-32-201ENST00000519290 311 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 HMGB1P40-201ENST00000525121 540 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC018628.1-201ENST00000624147 3819 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 RNU4-39P-201ENST00000362455 127 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 RN7SKP149-201ENST00000363008 344 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC107016.1-201ENST00000550463 337 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 DPPA3P2-202ENST00000557188 1219 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 MIR4737-201ENST00000583979 81 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 AC091953.5-201ENST00000622919 233 ntBASIC5.12□□□□□ -1.59
CHD8Q9HCK8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC5.12□□□□□ -1.59
CHD8Q9HCK8 RNA5SP455-201ENST00000365190 119 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 NPM1P33-201ENST00000438918 872 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 TXNP2-201ENST00000443918 295 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 RPL7P15-201ENST00000461190 712 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC009597.2-201ENST00000604659 592 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AL132640.2-201ENST00000559968 1698 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 RNU1-146P-201ENST00000364015 165 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AL359265.2-201ENST00000434367 631 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 REG1CP-206ENST00000447469 496 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 SCARNA9-201ENST00000530422 353 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC010168.2-201ENST00000562691 5428 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.11□□□□□ -1.59
CHD8Q9HCK8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD8Q9HCK8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms