Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL672212.1-201ENST00000422246 400 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 SETP9-201ENST00000423837 832 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AL365396.1-201ENST00000430854 671 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC064862.5-201ENST00000440618 334 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 KF459542.1-201ENST00000450908 553 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AL133351.3-201ENST00000454998 193 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC096741.1-201ENST00000472250 846 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 NACAP5-201ENST00000509863 636 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC023632.1-201ENST00000518463 375 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AP001803.1-201ENST00000525668 147 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 PDCL2P2-201ENST00000533651 189 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC004232.1-201ENST00000571388 208 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC022884.3-201ENST00000579571 248 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC138207.8-204ENST00000579588 527 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 RN7SL66P-201ENST00000582099 264 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC068790.7-201ENST00000602347 528 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AL358072.1-201ENST00000604156 575 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC097467.4-201ENST00000605504 141 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC099676.1-201ENST00000608886 657 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC018659.2-201ENST00000624690 715 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 MIR665-201ENST00000635949 72 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AC087821.2-201ENST00000637086 450 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 MFSD8-245ENST00000641743 948 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 RLIMP2-201ENST00000427891 1563 ntBASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM55Q9BYV6 AL356361.1-201ENST00000400943 1459 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 HMGB3P7-201ENST00000400214 611 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 RN7SKP268-201ENST00000411107 316 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 RNU2-18P-201ENST00000411224 162 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 GPN3P1-201ENST00000423883 535 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 DEFA9P-201ENST00000433042 285 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 MTND4P32-201ENST00000437189 1237 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 BX005266.3-201ENST00000443013 1075 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL161722.1-201ENST00000446972 1032 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 ANKRD26P4-201ENST00000455755 950 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 SULT1D1P-201ENST00000458020 882 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 PABPC1P10-201ENST00000464731 381 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 RPL35AP19-201ENST00000469425 329 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 TRBV8-2-201ENST00000475637 270 ntBASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM55Q9BYV6 SCARNA6-201ENST00000515982 265 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms